Variant report

Variant rs55719869
Chromosome Location chr2:179154974-179154975
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:26 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:179143000-179160200 Weak transcription Fetal Kidney kidney
2 chr2:179143200-179160800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
3 chr2:179143200-179188600 Weak transcription Brain Anterior Caudate brain
4 chr2:179144200-179163800 Weak transcription Duodenum Smooth Muscle Duodenum
5 chr2:179144600-179155000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
6 chr2:179145000-179159200 Weak transcription Liver Liver
7 chr2:179147400-179162600 Weak transcription HMEC breast
8 chr2:179147400-179163000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
9 chr2:179147400-179163000 Weak transcription NHEK skin
10 chr2:179147800-179162800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
11 chr2:179150200-179160800 Weak transcription Psoas Muscle Psoas
12 chr2:179150600-179160600 Weak transcription Skeletal Muscle Male skeletal muscle
13 chr2:179151600-179160800 Weak transcription Skeletal Muscle Female skeletal muscle
14 chr2:179151600-179161200 Weak transcription Fetal Adrenal Gland Adrenal Gland
15 chr2:179151800-179155000 Weak transcription Brain Inferior Temporal Lobe brain
16 chr2:179153200-179157200 Weak transcription K562 blood
17 chr2:179153200-179157400 Weak transcription Fetal Intestine Large intestine
18 chr2:179153200-179160200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
19 chr2:179153200-179160200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
20 chr2:179153200-179162800 Weak transcription HUVEC blood vessel
21 chr2:179154400-179155600 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
22 chr2:179154600-179155000 Enhancers Primary monocytes fromperipheralblood blood
23 chr2:179154600-179155200 Enhancers Primary neutrophils fromperipheralblood blood
24 chr2:179154600-179155600 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
25 chr2:179154600-179155600 ZNF genes & repeats Cortex derived primary cultured neurospheres brain
26 chr2:179154800-179163000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived

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