Variant report
| Variant | rs1840396 |
|---|---|
| Chromosome Location | chr12:32969214-32969215 |
| allele | G/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr12:32941800-33033400 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
| 2 | chr12:32943800-33026800 | Weak transcription | Fetal Kidney | kidney |
| 3 | chr12:32944200-32989400 | Weak transcription | Hela-S3 | cervix |
| 4 | chr12:32945800-32972400 | Weak transcription | Pancreatic Islets | Pancreatic Islet |
| 5 | chr12:32946000-32973600 | Weak transcription | H1 Cell Line | embryonic stem cell |
| 6 | chr12:32949200-32975200 | Weak transcription | Stomach Smooth Muscle | stomach |
| 7 | chr12:32949200-32987000 | Weak transcription | H9 Cell Line | embryonic stem cell |
| 8 | chr12:32949200-33007800 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 9 | chr12:32961000-32989800 | Strong transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 10 | chr12:32961400-32969400 | Strong transcription | NHEK | skin |
| 11 | chr12:32961400-32971000 | Strong transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 12 | chr12:32961800-32973400 | Weak transcription | HUES48 Cell Line | embryonic stem cell |
| 13 | chr12:32961800-32974800 | Weak transcription | Rectal Smooth Muscle | rectum |
| 14 | chr12:32962000-32973600 | Strong transcription | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 15 | chr12:32962200-32974000 | Strong transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 16 | chr12:32962400-32970600 | Weak transcription | Fetal Stomach | stomach |
| 17 | chr12:32962400-32973400 | Weak transcription | Gastric | stomach |
| 18 | chr12:32962400-32973400 | Weak transcription | Right Atrium | heart |
| 19 | chr12:32962600-32973400 | Weak transcription | Pancreas | Pancrea |
| 20 | chr12:32963000-32970600 | Weak transcription | Fetal Intestine Small | intestine |
| 21 | chr12:32963000-32986800 | Weak transcription | iPS-18 Cell Line | embryonic stem cell |
| 22 | chr12:32964400-32970600 | Weak transcription | Left Ventricle | heart |
| 23 | chr12:32964400-32973400 | Weak transcription | Colonic Mucosa | Colon |
| 24 | chr12:32964600-32970200 | Weak transcription | HMEC | breast |
| 25 | chr12:32965000-32970400 | Weak transcription | HUES64 Cell Line | embryonic stem cell |
| 26 | chr12:32965000-32970600 | Weak transcription | HepG2 | liver |
| 27 | chr12:32965000-32972400 | Weak transcription | HUES6 Cell Line | embryonic stem cell |
| 28 | chr12:32965000-32977800 | Strong transcription | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 29 | chr12:32965000-32996200 | Weak transcription | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
| 30 | chr12:32965400-32972600 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 31 | chr12:32966600-32977800 | Strong transcription | Duodenum Mucosa | Duodenum |
| 32 | chr12:32967000-32971000 | Strong transcription | Liver | Liver |
| 33 | chr12:32967000-32977800 | Strong transcription | Rectal Mucosa Donor 31 | rectum |
| 34 | chr12:32967000-32979000 | Strong transcription | Rectal Mucosa Donor 29 | rectum |
| 35 | chr12:32967400-32972400 | Weak transcription | Right Ventricle | heart |
| 36 | chr12:32967400-32973600 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 37 | chr12:32968400-32973200 | Weak transcription | Placenta Amnion | Placenta Amnion |
| 38 | chr12:32968400-32977400 | Strong transcription | Breast Myoepithelial Primary Cells | Breast |
| 39 | chr12:32968800-32969600 | Strong transcription | ES-I3 Cell Line | embryonic stem cell |
| 40 | chr12:32968800-32970600 | Strong transcription | Primary neutrophils fromperipheralblood | blood |
| 41 | chr12:32968800-32971800 | Genic enhancers | Fetal Heart | heart |
| 42 | chr12:32969000-32971200 | Strong transcription | Fetal Intestine Large | intestine |
| 43 | chr12:32969200-32969800 | Strong transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 44 | chr12:32969200-32970000 | Strong transcription | Placenta | Placenta |
| 45 | chr12:32969200-32970600 | Strong transcription | iPS-20b Cell Line | embryonic stem cell |
