The 2.0 version of rSNPBase
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Variant report
Variant
rs1845444
Chromosome Location
chrX:55116466-55116467
allele
C/G
Outlinks
Ensembl
 
UCSC
Chromatin state
Related regulatory elements
Target genes
Other information
TF binding region (count:0)
CpG islands (count:0)
Chromatin interactive region (count:0)
LncRNA region (count:0)
Mature miRNA region (count: 0)
miRNA target sites (count:0)
No data
No data
No data
No data
No data
No data
No data
Extended variants information (count: 8 )
Associated traits (count: 0)
rSNPs within LD-proxies of this variant (count:6)
rs_ID
r
2
[population]
rs12006936
1.00[MEX][hapmap]
rs12009010
1.00[MEX][hapmap]
rs35995915
1.00[MEX][hapmap]
rs4826379
1.00[MEX][hapmap]
rs7050286
1.00[MEX][hapmap]
rs727468
1.00[MEX][hapmap]
Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page:
1
No.
Variant name
Chromosome position
Chromatin state
Related regulatory elements
Target genes
Extended variants
Associated traits
1
esv19730
chrX:55086753-55121905
Enhancers Bivalent Enhancer
TF binding regionCpG island
3 gene(s)
inside rSNPs
n/a
2
esv3345340
chrX:55105625-55119598
Bivalent Enhancer
TF binding regionCpG island
1 gene(s)
inside rSNPs
n/a
No data
Chromatin state (count:0 , 50 per page) page:
No data
Quick Search:
Input of quick search could be:
dbSNP/dbVar ID:
rs12345
/
nsv7879
a single nucleotide as 0-based coordinates:
chr1:12345
chromosomal regions:
chr1:12345-34567
what's new
New variant types
New dimension of annotation
New regulatory manner
More detailed annotation on variant overlapped TFBS
More extended data
New search manner
Quick links