Variant report

Variant rs1849601
Chromosome Location chr2:20274044-20274045
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:54 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:20267200-20275000 Enhancers Placenta Placenta
2 chr2:20270000-20275200 Enhancers Fetal Muscle Leg muscle
3 chr2:20271000-20275000 Enhancers Pancreas Pancrea
4 chr2:20271200-20275000 Enhancers Left Ventricle heart
5 chr2:20272000-20274400 Enhancers NHEK skin
6 chr2:20272000-20280600 Weak transcription H1 Cell Line embryonic stem cell
7 chr2:20272200-20274200 Enhancers Fetal Muscle Trunk muscle
8 chr2:20272200-20274400 Enhancers Adipose Nuclei Adipose
9 chr2:20272200-20274400 Enhancers Fetal Lung lung
10 chr2:20272200-20275000 Enhancers Ovary ovary
11 chr2:20272400-20274400 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
12 chr2:20272400-20275000 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
13 chr2:20272400-20277200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
14 chr2:20272600-20275000 Enhancers Right Atrium heart
15 chr2:20272600-20275000 Enhancers Right Ventricle heart
16 chr2:20273000-20277000 Weak transcription HUES64 Cell Line embryonic stem cell
17 chr2:20273000-20279600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
18 chr2:20273200-20274400 Weak transcription Colon Smooth Muscle Colon
19 chr2:20273200-20281800 Weak transcription Hela-S3 cervix
20 chr2:20273400-20274200 Enhancers Fetal Intestine Small intestine
21 chr2:20273400-20274800 Weak transcription NHDF-Ad bronchial
22 chr2:20273600-20274200 Enhancers Fetal Kidney kidney
23 chr2:20273600-20274400 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
24 chr2:20273600-20274400 Weak transcription Placenta Amnion Placenta Amnion
25 chr2:20273800-20274200 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
26 chr2:20273800-20274200 Active TSS iPS-20b Cell Line embryonic stem cell
27 chr2:20273800-20274200 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
28 chr2:20273800-20274200 Active TSS Brain Angular Gyrus brain
29 chr2:20273800-20274200 Active TSS Duodenum Smooth Muscle Duodenum
30 chr2:20273800-20274200 Enhancers Stomach Mucosa stomach
31 chr2:20273800-20274200 Enhancers Stomach Smooth Muscle stomach
32 chr2:20273800-20274400 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
33 chr2:20273800-20274400 Flanking Active TSS HepG2 liver
34 chr2:20273800-20274400 Flanking Active TSS K562 blood
35 chr2:20273800-20274600 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
36 chr2:20273800-20275000 Enhancers Spleen Spleen
37 chr2:20274000-20274200 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
38 chr2:20274000-20274200 Enhancers Primary monocytes fromperipheralblood blood
39 chr2:20274000-20274200 Flanking Bivalent TSS/Enh Primary T cells fromperipheralblood blood
40 chr2:20274000-20274200 Flanking Active TSS Primary hematopoietic stem cells blood
41 chr2:20274000-20274200 Enhancers Primary T helper naive cells from peripheral blood blood
42 chr2:20274000-20274200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
43 chr2:20274000-20274200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
44 chr2:20274000-20274200 Flanking Active TSS Cortex derived primary cultured neurospheres brain
45 chr2:20274000-20274200 Enhancers Liver Liver
46 chr2:20274000-20274200 Enhancers Colonic Mucosa Colon
47 chr2:20274000-20274200 Enhancers Fetal Stomach stomach
48 chr2:20274000-20274400 Active TSS ES-I3 Cell Line embryonic stem cell
49 chr2:20274000-20274400 Enhancers iPS-18 Cell Line embryonic stem cell
50 chr2:20274000-20274400 Enhancers Ganglion Eminence derived primary cultured neurospheres brain

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