Variant report

Variant	rs185523896
Chromosome Location	chr4:21457550-21457551
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-GPR125-6	chr4:21454062-21463909	ucscGeneNc_uc003gqj_1

Extended variants
information (count: 36 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:36 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1013365	chr4:20834054-21609078	Bivalent/Poised TSS Flanking Active TSS Active TSS Weak transcription Enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	4 gene(s)	inside rSNPs	diseases
2	nsv1014062	chr4:21270358-21479027	Bivalent Enhancer Flanking Bivalent TSS/Enh Flanking Active TSS Enhancers Weak transcription Active TSS Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	2 gene(s)	inside rSNPs	diseases
3	nsv829879	chr4:21418568-21611002	Weak transcription Strong transcription Enhancers Active TSS ZNF genes & repeats Flanking Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA	2 gene(s)	inside rSNPs	diseases
4	nsv998481	chr4:21421945-21608805	Enhancers Weak transcription Active TSS Flanking Active TSS Strong transcription ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA	2 gene(s)	inside rSNPs	diseases
5	esv18843	chr4:21448552-21467379	Enhancers Weak transcription Bivalent Enhancer	lncRNA miRNA	n/a	inside rSNPs	n/a
6	nsv518367	chr4:21448780-21461121	Enhancers Weak transcription Bivalent Enhancer	lncRNA	n/a	inside rSNPs	n/a
7	esv2760822	chr4:21450944-21467397	Enhancers Weak transcription Bivalent Enhancer	lncRNA miRNA	n/a	inside rSNPs	n/a
8	esv3341168	chr4:21455654-21460052	Enhancers Weak transcription	lncRNA	n/a	inside rSNPs	n/a
9	nsv593798	chr4:21455877-21458355	Enhancers Weak transcription	lncRNA	n/a	inside rSNPs	n/a
10	nsv511253	chr4:21455877-21461121	Weak transcription Enhancers	lncRNA	n/a	inside rSNPs	n/a
11	nsv593799	chr4:21456023-21458355	Weak transcription Enhancers	lncRNA	n/a	inside rSNPs	n/a
12	nsv593800	chr4:21456023-21471568	Enhancers Weak transcription Active TSS	Chromatin interactive region lncRNA miRNA	n/a	inside rSNPs	n/a
13	esv3485496	chr4:21456254-21459552	Weak transcription Enhancers	lncRNA	n/a	inside rSNPs	n/a
14	esv3485490	chr4:21456604-21459402	Weak transcription Enhancers	lncRNA	n/a	inside rSNPs	n/a
15	nsv513124	chr4:21456960-21458453	Weak transcription	lncRNA	n/a	inside rSNPs	n/a
16	esv3464896	chr4:21457331-21458507	Weak transcription	lncRNA	n/a	inside rSNPs	n/a
17	esv3485494	chr4:21457340-21458498	Weak transcription	lncRNA	n/a	inside rSNPs	n/a
18	esv3485493	chr4:21457341-21458472	Weak transcription	lncRNA	n/a	inside rSNPs	n/a
19	esv3485495	chr4:21457359-21458433	Weak transcription	lncRNA	n/a	inside rSNPs	n/a
20	esv3464899	chr4:21457364-21458475	Weak transcription	lncRNA	n/a	inside rSNPs	n/a
21	nsv822504	chr4:21457366-21458367	Weak transcription	lncRNA	n/a	inside rSNPs	n/a
22	nsv822505	chr4:21457366-21458393	Weak transcription	lncRNA	n/a	inside rSNPs	n/a
23	nsv820351	chr4:21457366-21458411	Weak transcription	lncRNA	n/a	inside rSNPs	n/a
24	esv3464898	chr4:21457373-21458468	Weak transcription	lncRNA	n/a	inside rSNPs	n/a
25	esv3464895	chr4:21457382-21458431	Weak transcription	lncRNA	n/a	inside rSNPs	n/a
26	esv3485492	chr4:21457386-21458436	Weak transcription	lncRNA	n/a	inside rSNPs	n/a
27	esv3485491	chr4:21457390-21458437	Weak transcription	lncRNA	n/a	inside rSNPs	n/a
28	esv3491769	chr4:21457430-21458190	Weak transcription	lncRNA	n/a	inside rSNPs	n/a
29	esv3491770	chr4:21457430-21458190	Weak transcription	lncRNA	n/a	inside rSNPs	n/a
30	esv3464900	chr4:21457445-21458388	Weak transcription	lncRNA	n/a	inside rSNPs	n/a
31	esv3485498	chr4:21457445-21458388	Weak transcription	lncRNA	n/a	inside rSNPs	n/a
32	esv3421277	chr4:21457463-21458394	Weak transcription	lncRNA	n/a	inside rSNPs	n/a
33	esv15232	chr4:21457508-21458519	Weak transcription	lncRNA	n/a	inside rSNPs	n/a
34	nsv593801	chr4:21457536-21458304	Weak transcription	lncRNA	n/a	inside rSNPs	n/a
35	nsv593802	chr4:21457536-21458355	Weak transcription	lncRNA	n/a	inside rSNPs	n/a
36	nsv593803	chr4:21457536-21461121	Weak transcription	lncRNA	n/a	inside rSNPs	n/a

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:21448400-21465600	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived

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