Variant report

Variant	rs1858788
Chromosome Location	chr7:126688238-126688239
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 9 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:8)

rs_ID	r²[population]
rs10256057	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs1419444	0.96[CHB][hapmap];1.00[JPT][hapmap];0.87[ASN][1000 genomes]
rs1544326	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs2237782	1.00[CHB][hapmap];1.00[JPT][hapmap];0.99[ASN][1000 genomes]
rs2237785	0.81[CEU][hapmap]
rs2402851	0.80[CEU][hapmap]
rs2402852	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs929173	1.00[CHB][hapmap];1.00[JPT][hapmap];0.91[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv831121	chr7:126593363-126774413	Enhancers ZNF genes & repeats Weak transcription Flanking Active TSS Active TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	6 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:0 , 50 per page) page:

No data

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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