Variant report

Variant	rs1864074
Chromosome Location	chr19:41104860-41104861
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ZNF143	chr19:41104464-41104860	GM12878	blood:	n/a	chr19:41104637-41104655
2	CTCF	chr19:41103838-41105632	SK-N-SH	brain:	n/a	chr19:41104670-41104688 chr19:41104671-41104687 chr19:41104665-41104686
3	CTCF	chr19:41104460-41104887	IMR90	lung:	n/a	chr19:41104670-41104688 chr19:41104671-41104687 chr19:41104665-41104686
4	CTCF	chr19:41104446-41104904	K562	blood:	n/a	chr19:41104670-41104688 chr19:41104671-41104687 chr19:41104665-41104686
5	ELF1	chr19:41103988-41105030	A549	lung:	n/a	n/a
6	BHLHE40	chr19:41104154-41104924	A549	lung:	n/a	n/a
7	SP1	chr19:41103897-41104863	H1-hESC	embryonic stem cell:	n/a	chr19:41104729-41104739 chr19:41104728-41104740 chr19:41104230-41104240 chr19:41104229-41104241 chr19:41104729-41104738 chr19:41104728-41104740 chr19:41104725-41104739 chr19:41104229-41104241 chr19:41104730-41104739 chr19:41104230-41104240
8	GATA3	chr19:41102545-41105109	A549	lung:	n/a	n/a
9	GTF2F1	chr19:41104539-41104872	Hela-S3	cervix:	n/a	n/a
10	RAD21	chr19:41104453-41104885	GM12878	blood:	n/a	chr19:41104668-41104687
11	HDAC2	chr19:41104369-41104883	MCF-7	breast:	n/a	n/a
12	JUND	chr19:41103719-41104902	A549	lung:	n/a	n/a
13	RCOR1	chr19:41104061-41105014	Hela-S3	cervix:	n/a	n/a
14	ZNF263	chr19:41104056-41105826	HEK293-T-REx	kidney:	n/a	chr19:41104588-41104609 chr19:41105291-41105300
15	EP300	chr19:41103823-41104872	K562	blood:	n/a	chr19:41104647-41104663
16	RAD21	chr19:41104079-41105123	A549	lung:	n/a	chr19:41104668-41104687 chr19:41104201-41104220
17	BCL3	chr19:41103204-41105215	A549	lung:	n/a	chr19:41103561-41103574
18	POLR2A	chr19:41103565-41104902	K562	blood:	n/a	n/a
19	ZBTB7A	chr19:41104153-41104872	K562	blood:	n/a	chr19:41104363-41104371
20	ETS1	chr19:41104027-41105076	A549	lung:	n/a	n/a
21	CTCF	chr19:41104208-41104997	HCT-116	colon:	n/a	chr19:41104670-41104688 chr19:41104671-41104687 chr19:41104665-41104686
22	CTCF	chr19:41102201-41106331	A549	lung:	n/a	chr19:41104670-41104688 chr19:41104671-41104687 chr19:41102391-41102404 chr19:41104665-41104686
23	IRF1	chr19:41104404-41105031	K562	blood:	n/a	n/a
24	CTCF	chr19:41103990-41105142	HCT-116	colon:	n/a	chr19:41104670-41104688 chr19:41104671-41104687 chr19:41104665-41104686
25	IRF1	chr19:41104501-41104905	K562	blood:	n/a	n/a
26	POLR2A	chr19:41104557-41104864	HUVEC	blood vessel:	n/a	n/a
27	SIX5	chr19:41104021-41104984	A549	lung:	n/a	n/a
28	KAP1	chr19:41104305-41105064	HEK293	kidney:	n/a	n/a
29	BACH1	chr19:41104654-41105461	K562	blood:	n/a	n/a
30	SP1	chr19:41103465-41104986	A549	lung:	n/a	chr19:41104729-41104739 chr19:41104728-41104740 chr19:41104230-41104240 chr19:41103564-41103576 chr19:41103565-41103575 chr19:41103561-41103575 chr19:41104229-41104241 chr19:41104729-41104738 chr19:41103568-41103582 chr19:41103565-41103574 chr19:41104728-41104740 chr19:41104725-41104739 chr19:41104229-41104241 chr19:41104730-41104739 chr19:41103564-41103576 chr19:41104230-41104240
31	YY1	chr19:41104448-41104895	K562	blood:	n/a	chr19:41104654-41104676 chr19:41104682-41104704
32	SIN3AK20	chr19:41104253-41105143	A549	lung:	n/a	n/a
33	HCFC1	chr19:41103818-41104926	Hela-S3	cervix:	n/a	n/a
34	ZNF143	chr19:41104200-41104987	H1-hESC	embryonic stem cell:	n/a	chr19:41104637-41104655
35	SMC3	chr19:41104464-41105042	GM12878	blood:	n/a	n/a
36	MAZ	chr19:41104506-41104873	GM12878	blood:	n/a	n/a
37	SMC3	chr19:41104217-41105064	SK-N-SH	brain:	n/a	n/a
38	CTCF	chr19:41104350-41104872	A549	lung:	n/a	chr19:41104670-41104688 chr19:41104671-41104687 chr19:41104665-41104686
39	CUX1	chr19:41104266-41104988	K562	blood:	n/a	n/a
40	TEAD4	chr19:41104265-41105091	K562	blood:	n/a	n/a
41	YY1	chr19:41104019-41105069	A549	lung:	n/a	chr19:41104654-41104676 chr19:41104682-41104704
42	JUND	chr19:41104000-41104961	K562	blood:	n/a	n/a
43	RAD21	chr19:41104450-41104941	HepG2	liver:	n/a	chr19:41104668-41104687
44	REST	chr19:41103295-41105223	A549	lung:	n/a	n/a
45	CTCF	chr19:41104393-41104864	H1-hESC	embryonic stem cell:	n/a	chr19:41104670-41104688 chr19:41104671-41104687 chr19:41104665-41104686
46	RAD21	chr19:41104449-41104863	Hela-S3	cervix:	n/a	chr19:41104668-41104687
47	RAD21	chr19:41104325-41104986	MCF-7	breast:	n/a	chr19:41104668-41104687
48	SIX5	chr19:41102535-41105874	A549	lung:	n/a	n/a
49	SMC3	chr19:41104288-41104865	K562	blood:	n/a	n/a
50	RAD21	chr19:41104032-41105094	SK-N-SH	brain:	n/a	chr19:41104668-41104687 chr19:41104201-41104220

No.	Distal block	Cell Line	Cell type
1	chr19:40967363..40973578-chr19:41101518..41109514,8	K562	blood:
2	chr19:40970256..40972246-chr19:41104654..41107046,2	MCF-7	breast:
3	chr19:41081508..41084656-chr19:41104716..41107591,3	K562	blood:
4	chr19:41081761..41084466-chr19:41100896..41105533,6	MCF-7	breast:
5	chr19:40696492..40699360-chr19:41104510..41106083,2	MCF-7	breast:
6	chr19:41075233..41077864-chr19:41102311..41105229,3	K562	blood:
7	chr19:41031800..41040224-chr19:41101608..41111828,17	K562	blood:
8	chr19:41035813..41036622-chr19:41104272..41105118,3	MCF-7	breast:
9	chr12:54674360..54676219-chr19:41102639..41105279,2	K562	blood:
10	chr19:41104685..41106959-chr19:41114610..41116415,2	MCF-7	breast:
11	chr19:41075285..41077468-chr19:41102388..41105229,2	K562	blood:

Variant related genes	Relation type
LTBP4	TF binding region
ENSG00000160460	Chromatin interaction
ENSG00000135486	Chromatin interaction
ENSG00000090013	Chromatin interaction
ENSG00000160410	Chromatin interaction
ENSG00000090006	Chromatin interaction
ENSG00000130758	Chromatin interaction

Extended variants
information (count: 58 )
Associated
traits (count: 8 )

rSNPs within LD-proxies of this variant (count:42)

rs_ID	r²[population]
rs10402698	0.82[ASN][1000 genomes]
rs10403467	0.85[AMR][1000 genomes];0.82[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs10403833	0.90[AMR][1000 genomes];0.87[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs10403963	0.81[CEU][hapmap];1.00[CHB][hapmap];0.90[CHD][hapmap];0.93[GIH][hapmap];0.84[JPT][hapmap];0.91[MEX][hapmap];0.95[TSI][hapmap];0.88[AMR][1000 genomes];0.82[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs10405930	0.88[CEU][hapmap];1.00[CHB][hapmap];0.93[CHD][hapmap];0.95[GIH][hapmap];0.90[JPT][hapmap];0.86[MEX][hapmap];0.98[TSI][hapmap];0.90[AMR][1000 genomes];0.87[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs10410606	1.00[CHB][hapmap];0.93[CHD][hapmap];0.95[GIH][hapmap];0.90[JPT][hapmap];0.95[MEX][hapmap];0.91[TSI][hapmap];0.90[AMR][1000 genomes];0.93[ASN][1000 genomes]
rs1051303	0.81[CEU][hapmap];1.00[CHB][hapmap];0.90[CHD][hapmap];0.93[GIH][hapmap];0.84[JPT][hapmap];0.95[TSI][hapmap];0.85[AMR][1000 genomes];0.82[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs11083561	0.90[AMR][1000 genomes];0.94[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1131620	0.81[CEU][hapmap];1.00[CHB][hapmap];0.93[CHD][hapmap];0.93[GIH][hapmap];0.89[JPT][hapmap];0.95[TSI][hapmap];0.85[AMR][1000 genomes];0.82[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs11667706	0.81[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11667772	0.81[AMR][1000 genomes];0.90[ASN][1000 genomes]
rs12610819	0.83[CHB][hapmap];0.80[GIH][hapmap]
rs12611045	0.91[ASN][1000 genomes]
rs12980111	0.81[AMR][1000 genomes];0.86[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs1318544	0.91[AMR][1000 genomes];0.88[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs1864078	1.00[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];0.94[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1869712	0.87[AMR][1000 genomes];0.88[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs2278242	0.83[CHB][hapmap]
rs2278246	0.81[AMR][1000 genomes];0.81[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs2303727	0.86[AMR][1000 genomes];0.82[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs2303729	1.00[CHB][hapmap];0.95[CHD][hapmap];0.98[GIH][hapmap];0.90[JPT][hapmap];1.00[MEX][hapmap];0.81[MKK][hapmap];0.91[TSI][hapmap];0.87[AMR][1000 genomes];0.93[ASN][1000 genomes]
rs2369006	1.00[CHB][hapmap];0.84[JPT][hapmap];0.92[ASN][1000 genomes]
rs2604902	0.80[CEU][hapmap];1.00[CHB][hapmap];0.93[CHD][hapmap];0.95[GIH][hapmap];0.89[JPT][hapmap];0.91[MEX][hapmap];0.95[TSI][hapmap];0.91[AMR][1000 genomes];0.83[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs28649715	0.92[ASN][1000 genomes]
rs28655571	0.84[AMR][1000 genomes];0.87[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs392726	0.84[ASW][hapmap];0.94[CHB][hapmap];0.91[CHD][hapmap];0.93[MKK][hapmap];0.80[TSI][hapmap];0.88[ASN][1000 genomes]
rs393569	0.84[ASW][hapmap];0.94[CHB][hapmap];0.93[CHD][hapmap];0.80[LWK][hapmap];0.95[MKK][hapmap];0.80[TSI][hapmap];0.87[ASN][1000 genomes]
rs396118	0.88[ASN][1000 genomes]
rs404584	0.87[CHB][hapmap];0.86[ASN][1000 genomes]
rs406133	0.85[ASN][1000 genomes]
rs410101	0.83[CHB][hapmap];0.83[CHD][hapmap]
rs413901	0.83[CHB][hapmap];0.83[CHD][hapmap]
rs415075	0.82[AFR][1000 genomes];0.86[ASN][1000 genomes]
rs420720	0.87[ASN][1000 genomes]
rs4803348	0.91[ASN][1000 genomes]
rs56353506	0.92[ASN][1000 genomes]
rs7171	0.88[ASN][1000 genomes]
rs7259067	0.88[CEU][hapmap];0.94[CHB][hapmap];0.90[CHD][hapmap];0.95[GIH][hapmap];0.84[JPT][hapmap];0.83[MEX][hapmap];0.95[TSI][hapmap];0.88[AMR][1000 genomes];0.87[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7259237	0.88[CEU][hapmap];1.00[CHB][hapmap];0.90[CHD][hapmap];0.95[GIH][hapmap];0.84[JPT][hapmap];0.95[TSI][hapmap];0.85[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7259554	0.88[CEU][hapmap];1.00[CHB][hapmap];0.90[CHD][hapmap];0.95[GIH][hapmap];0.84[JPT][hapmap];0.95[TSI][hapmap];0.85[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs8107014	0.81[CEU][hapmap];1.00[CHB][hapmap];0.90[CHD][hapmap];0.93[GIH][hapmap];0.84[JPT][hapmap];0.95[TSI][hapmap];0.81[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs919307	0.87[AMR][1000 genomes];0.88[EUR][1000 genomes];0.93[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:16 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv1830682	chr19:40880127-41270055	Weak transcription Strong transcription Enhancers Genic enhancers Active TSS Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	139 gene(s)	inside rSNPs	diseases
2	nsv911714	chr19:41006426-41165252	Enhancers Weak transcription Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent Enhancer Strong transcription Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	33 gene(s)	inside rSNPs	diseases
3	nsv911715	chr19:41014922-41141434	Bivalent Enhancer Flanking Active TSS Strong transcription Weak transcription Active TSS Enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	33 gene(s)	inside rSNPs	diseases
4	nsv1057634	chr19:41019512-41174259	Enhancers Active TSS Strong transcription Genic enhancers Weak transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	37 gene(s)	inside rSNPs	diseases
5	nsv911716	chr19:41023511-41109456	Active TSS Bivalent Enhancer Enhancers Bivalent/Poised TSS Flanking Active TSS Weak transcription Strong transcription Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	21 gene(s)	inside rSNPs	diseases
6	nsv911717	chr19:41023511-41141434	Enhancers Flanking Bivalent TSS/Enh Weak transcription Active TSS Flanking Active TSS Bivalent/Poised TSS Strong transcription Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	33 gene(s)	inside rSNPs	diseases
7	nsv911719	chr19:41033109-41147087	Weak transcription Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Genic enhancers Enhancers Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	33 gene(s)	inside rSNPs	diseases
8	nsv911720	chr19:41033109-41156940	Flanking Active TSS Enhancers Bivalent/Poised TSS Weak transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Strong transcription Active TSS Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	33 gene(s)	inside rSNPs	diseases
9	nsv911721	chr19:41040334-41124931	Weak transcription Enhancers Bivalent Enhancer Active TSS Flanking Active TSS Strong transcription Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	33 gene(s)	inside rSNPs	diseases
10	nsv911722	chr19:41040334-41176403	Bivalent Enhancer Enhancers Weak transcription Active TSS Strong transcription Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	37 gene(s)	inside rSNPs	diseases
11	nsv911723	chr19:41075990-41195279	Active TSS Strong transcription Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Genic enhancers Enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	38 gene(s)	inside rSNPs	diseases
12	nsv869561	chr19:41077513-41139834	Weak transcription Active TSS Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Strong transcription Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	33 gene(s)	inside rSNPs	diseases
13	nsv1064699	chr19:41086506-41174259	Genic enhancers Bivalent Enhancer Enhancers Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Weak transcription Strong transcription Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	37 gene(s)	inside rSNPs	diseases
14	nsv911724	chr19:41089505-41165252	Bivalent/Poised TSS Strong transcription Enhancers Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	33 gene(s)	inside rSNPs	diseases
15	nsv911725	chr19:41090190-41114065	Bivalent Enhancer Enhancers Weak transcription Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Strong transcription Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	25 gene(s)	inside rSNPs	diseases
16	nsv911726	chr19:41090190-41141434	Weak transcription Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Enhancers Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	31 gene(s)	inside rSNPs	diseases

mRNA abundance (count:8)

SNP	Gene	Cis/trans	Tissue	Source
rs1864074	ELSPBP1	cis	cerebellum	SCAN
rs1864074	CA11	cis	cerebellum	SCAN
rs1864074	QPCTL	cis	cerebellum	SCAN
rs1864074	ZNF296	cis	cerebellum	SCAN
rs1864074	CEACAM6	cis	cerebellum	SCAN
rs1864074	B9D2	cis	parietal	SCAN
rs1864074	PGLYRP1	cis	cerebellum	SCAN
rs1864074	DMRTC2	cis	cerebellum	SCAN

Chromatin state (count:91 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr19:41102200-41106400	Bivalent Enhancer	Placenta	Placenta
2	chr19:41102400-41108600	Bivalent Enhancer	Primary B cells from peripheral blood	blood
3	chr19:41102400-41109200	Bivalent Enhancer	Primary Natural Killer cells fromperipheralblood	blood
4	chr19:41102600-41105000	Bivalent Enhancer	Primary monocytes fromperipheralblood	blood
5	chr19:41102600-41105600	Bivalent/Poised TSS	HUES64 Cell Line	embryonic stem cell
6	chr19:41102600-41108200	Bivalent Enhancer	Primary B cells from cord blood	blood
7	chr19:41102600-41108200	Bivalent Enhancer	Primary T helper memory cells from peripheral blood 1	blood
8	chr19:41102800-41105000	Active TSS	H9 Cell Line	embryonic stem cell
9	chr19:41102800-41106400	Bivalent/Poised TSS	HUES6 Cell Line	embryonic stem cell
10	chr19:41103000-41105000	Bivalent/Poised TSS	H1 Cell Line	embryonic stem cell
11	chr19:41103000-41106600	Enhancers	Brain Dorsolateral Prefrontal Cortex	brain
12	chr19:41103000-41107000	Bivalent Enhancer	Foreskin Melanocyte Primary Cells skin03	Skin
13	chr19:41103000-41107600	Bivalent Enhancer	Primary T cells fromperipheralblood	blood
14	chr19:41103200-41105000	Flanking Bivalent TSS/Enh	Fetal Muscle Trunk	muscle
15	chr19:41103200-41105200	Bivalent/Poised TSS	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
16	chr19:41103200-41105600	Bivalent Enhancer	Primary T cells effector/memory enriched fromperipheralblood	blood
17	chr19:41103200-41106000	Bivalent/Poised TSS	ES-I3 Cell Line	embryonic stem cell
18	chr19:41103200-41107800	Bivalent Enhancer	Primary T killer naive cells fromperipheralblood	blood
19	chr19:41103400-41105000	Bivalent Enhancer	Primary T helper naive cells fromperipheralblood	blood
20	chr19:41103400-41105000	Bivalent Enhancer	Primary T helper 17 cells PMA-I stimulated	--
21	chr19:41103400-41105000	Bivalent Enhancer	Monocytes-CD14+_RO01746	blood
22	chr19:41103400-41105800	Weak transcription	Right Atrium	heart
23	chr19:41103400-41106200	Bivalent Enhancer	Primary T helper cells fromperipheralblood	blood
24	chr19:41103400-41106400	Weak transcription	Aorta	Aorta
25	chr19:41103400-41106600	Weak transcription	Gastric	stomach
26	chr19:41103400-41106600	Weak transcription	Pancreas	Pancrea
27	chr19:41103400-41107200	Bivalent Enhancer	Primary T helper naive cells from peripheral blood	blood
28	chr19:41103400-41107200	Bivalent Enhancer	Fetal Thymus	thymus
29	chr19:41103600-41105400	Bivalent Enhancer	Primary T killer memory cells from peripheral blood	blood
30	chr19:41103600-41105400	Weak transcription	Lung	lung
31	chr19:41103600-41105600	Bivalent Enhancer	Primary hematopoietic stem cells short term culture	blood
32	chr19:41103800-41105000	Bivalent/Poised TSS	Brain Germinal Matrix	brain
33	chr19:41103800-41105600	Bivalent/Poised TSS	Fetal Kidney	kidney
34	chr19:41103800-41107800	Bivalent/Poised TSS	iPS-20b Cell Line	embryonic stem cell
35	chr19:41103800-41108400	Bivalent/Poised TSS	iPS-18 Cell Line	embryonic stem cell
36	chr19:41104000-41105000	Flanking Bivalent TSS/Enh	Fetal Intestine Small	intestine
37	chr19:41104000-41106400	Bivalent/Poised TSS	iPS-15b Cell Line	embryonic stem cell
38	chr19:41104000-41106400	Bivalent Enhancer	Skeletal Muscle Female	skeletal muscle
39	chr19:41104200-41106000	Flanking Active TSS	Hela-S3	cervix
40	chr19:41104200-41107400	Bivalent Enhancer	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
41	chr19:41104400-41105000	Bivalent/Poised TSS	ES-WA7 Cell Line	embryonic stem cell
42	chr19:41104400-41105000	Bivalent Enhancer	Colon Smooth Muscle	Colon
43	chr19:41104400-41105000	Enhancers	Left Ventricle	heart
44	chr19:41104400-41105200	Bivalent Enhancer	Primary T cells from cord blood	blood
45	chr19:41104400-41105200	Enhancers	Sigmoid Colon	Sigmoid Colon
46	chr19:41104400-41105400	Bivalent Enhancer	Liver	Liver
47	chr19:41104400-41106400	Bivalent Enhancer	Adipose Nuclei	Adipose
48	chr19:41104400-41107400	Enhancers	Spleen	Spleen
49	chr19:41104600-41105000	Active TSS	IMR90 fetal lung fibroblasts Cell Line	lung
50	chr19:41104600-41105000	Bivalent Enhancer	Primary T helper cells PMA-I stimulated	--

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