Variant report

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs10093624	0.90[AMR][1000 genomes]
rs10093737	0.90[AMR][1000 genomes]
rs10093876	0.88[AMR][1000 genomes]
rs10094743	0.88[AMR][1000 genomes]
rs10109232	0.88[AMR][1000 genomes]
rs10112039	0.88[AMR][1000 genomes]
rs10112119	0.88[AMR][1000 genomes]
rs11987927	0.89[ASN][1000 genomes]
rs11988606	0.82[ASN][1000 genomes]
rs11991574	0.89[ASN][1000 genomes]
rs17064772	0.83[AFR][1000 genomes];0.81[AMR][1000 genomes];0.90[ASN][1000 genomes]
rs17064774	0.82[AFR][1000 genomes];0.81[AMR][1000 genomes];0.90[ASN][1000 genomes]
rs17064779	0.83[AFR][1000 genomes];0.81[AMR][1000 genomes];0.90[ASN][1000 genomes]
rs17831401	0.90[ASN][1000 genomes]
rs4409421	0.81[ASN][1000 genomes]
rs55903327	0.94[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs7014505	0.83[AFR][1000 genomes];0.81[AMR][1000 genomes];0.82[ASN][1000 genomes]
rs73552747	0.83[AFR][1000 genomes];0.81[AMR][1000 genomes];0.90[ASN][1000 genomes]
rs73657783	0.83[AFR][1000 genomes];0.81[AMR][1000 genomes];0.89[ASN][1000 genomes]
rs7828726	0.90[AMR][1000 genomes]
rs7829339	0.90[AMR][1000 genomes]
rs7829787	0.90[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv889712	chr8:1591412-2337777	Weak transcription Active TSS Strong transcription Enhancers ZNF genes & repeats Bivalent Enhancer Genic enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	22 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:2076000-2109600	Weak transcription	Right Atrium	heart
2	chr8:2093000-2103400	Weak transcription	Pancreas	Pancrea
3	chr8:2093000-2107200	Weak transcription	Gastric	stomach
4	chr8:2094000-2122400	Weak transcription	Right Ventricle	heart
5	chr8:2097600-2104000	Weak transcription	Fetal Muscle Leg	muscle
6	chr8:2101000-2118000	Weak transcription	Skeletal Muscle Female	skeletal muscle
7	chr8:2101800-2103800	Weak transcription	Fetal Thymus	thymus
8	chr8:2102800-2104000	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
9	chr8:2103000-2103400	Weak transcription	Left Ventricle	heart
10	chr8:2103200-2104600	Enhancers	Primary T helper naive cells fromperipheralblood	blood

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