Variant report

Variant	rs1869194
Chromosome Location	chr8:53627252-53627253
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	CHD2	chr8:53625664-53627599	GM12878	blood:	n/a	chr8:53626473-53626483
2	POLR2A	chr8:53626267-53627650	GM15510	blood:	n/a	n/a
3	KAP1	chr8:53627086-53627752	U2OS	brain:	n/a	n/a
4	POLR2A	chr8:53626792-53627402	HepG2	liver:	n/a	n/a
5	POLR2A	chr8:53626144-53627564	GM12878	blood:	n/a	n/a
6	ELF1	chr8:53626793-53627329	K562	blood:	n/a	chr8:53627116-53627125 chr8:53627075-53627088 chr8:53627112-53627124
7	TAF1	chr8:53626895-53627388	GM12891	blood:	n/a	n/a
8	TAF1	chr8:53626810-53627363	MCF-7	breast:	n/a	n/a
9	MYC	chr8:53626806-53628063	K562	blood:	n/a	n/a
10	ELF1	chr8:53626803-53627342	SK-N-SH	brain:	n/a	chr8:53627116-53627125 chr8:53627075-53627088 chr8:53627112-53627124
11	POLR2A	chr8:53626672-53627724	K562	blood:	n/a	n/a
12	IRF1	chr8:53626853-53627371	K562	blood:	n/a	chr8:53627109-53627123
13	POLR2A	chr8:53626793-53627471	A549	lung:	n/a	n/a
14	POLR2A	chr8:53625628-53627753	H1-neurons	neurons:	n/a	n/a
15	CHD2	chr8:53626946-53627580	H1-hESC	embryonic stem cell:	n/a	n/a
16	FOXA1	chr8:53626845-53627370	T-47D	breast:	n/a	n/a
17	TBP	chr8:53626678-53627594	H1-hESC	embryonic stem cell:	n/a	n/a
18	ELF1	chr8:53626852-53627269	HepG2	liver:	n/a	chr8:53627116-53627125 chr8:53627075-53627088 chr8:53627112-53627124
19	UBTF	chr8:53625859-53627566	K562	blood:	n/a	n/a
20	ELK1	chr8:53626838-53627946	Hela-S3	cervix:	n/a	n/a
21	MAZ	chr8:53625715-53627562	Hela-S3	cervix:	n/a	chr8:53626510-53626519 chr8:53626049-53626058
22	YY1	chr8:53626821-53627293	SK-N-SH	brain:	n/a	chr8:53627108-53627122 chr8:53627111-53627125 chr8:53626953-53626967
23	POLR2A	chr8:53625584-53627676	K562	blood:	n/a	n/a
24	BHLHE40	chr8:53626807-53627506	GM12878	blood:	n/a	n/a
25	YY1	chr8:53626638-53627577	GM12891	blood:	n/a	chr8:53626698-53626707 chr8:53627108-53627122 chr8:53627111-53627125 chr8:53626655-53626669 chr8:53626953-53626967
26	YY1	chr8:53626439-53627661	GM12878	blood:	n/a	chr8:53626617-53626626 chr8:53626698-53626707 chr8:53627108-53627122 chr8:53627111-53627125 chr8:53626655-53626669 chr8:53626568-53626582 chr8:53626953-53626967
27	MAX	chr8:53626891-53627273	K562	blood:	n/a	n/a
28	ELF1	chr8:53626814-53627374	HepG2	liver:	n/a	chr8:53627116-53627125 chr8:53627075-53627088 chr8:53627112-53627124
29	POLR2A	chr8:53626702-53627567	HUVEC	blood vessel:	n/a	n/a
30	TAF1	chr8:53626846-53627290	GM12891	blood:	n/a	n/a
31	GABPA	chr8:53626877-53627468	HepG2	liver:	n/a	n/a
32	POLR2A	chr8:53626738-53628474	K562	blood:	n/a	n/a
33	POLR2A	chr8:53625997-53627590	MCF-7	breast:	n/a	n/a
34	MXI1	chr8:53626805-53627732	H1-hESC	embryonic stem cell:	n/a	n/a
35	SMC3	chr8:53626799-53627538	GM12878	blood:	n/a	chr8:53627049-53627059
36	TAF1	chr8:53626653-53627704	ECC-1	luminal epithelium:	n/a	n/a
37	ELF1	chr8:53626795-53627543	K562	blood:	n/a	chr8:53627116-53627125 chr8:53627075-53627088 chr8:53627112-53627124
38	TAF1	chr8:53626787-53627504	HepG2	liver:	n/a	n/a
39	TAF1	chr8:53626812-53627324	SK-N-SH	brain:	n/a	n/a
40	MYC	chr8:53625369-53628061	K562	blood:	n/a	chr8:53626510-53626519 chr8:53626049-53626058
41	POLR2A	chr8:53626819-53627602	H1-hESC	embryonic stem cell:	n/a	n/a
42	POLR2A	chr8:53625636-53627576	K562	blood:	n/a	n/a
43	TAF1	chr8:53626478-53627634	H1-neurons	neurons:	n/a	n/a
44	CHD2	chr8:53626834-53627524	K562	blood:	n/a	n/a
45	FOXP2	chr8:53626795-53627570	PFSK-1	brain:	n/a	n/a
46	NRF1	chr8:53626872-53627252	Hela-S3	cervix:	n/a	n/a
47	SIN3A	chr8:53625325-53627753	H1-hESC	embryonic stem cell:	n/a	chr8:53627425-53627434
48	POLR2A	chr8:53625899-53627526	HL-60	blood:	n/a	n/a
49	SIN3AK20	chr8:53626839-53627394	A549	lung:	n/a	n/a
50	MXI1	chr8:53625631-53628270	GM12878	blood:	n/a	n/a

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr8:53627208-53627258	HCPEpiC	choroid plexus:	n/a
2	chr8:53627208-53627258	GM12892	blood:	n/a
3	chr8:53627203-53627253	NT2-D1	testis:	n/a
4	chr8:53627208-53627258	H1-hESC	embryonic stem cell:	embryo
5	chr8:53627203-53627253	HMEC	breast:	n/a
6	chr8:53627208-53627258	NHDF-neo	bronchial:	n/a
7	chr8:53627203-53627253	T-47D	breast:	n/a
8	chr8:53627208-53627258	SK-N-SH_RA	brain:	n/a
9	chr8:53627203-53627253	RPTEC	kidney:	n/a
10	chr8:53627203-53627253	Hepatocyte	liver:	n/a
11	chr8:53627203-53627253	MCF10A-Er-Src	breast:	n/a
12	chr8:53627203-53627253	GM19239	blood:	n/a
13	chr8:53627203-53627253	HNPCEpiC	eye:	n/a
14	chr8:53627208-53627258	PANC-1	pancreas:	n/a
15	chr8:53627208-53627258	LNCaP	prostate:	n/a
16	chr8:53627208-53627258	NH-A	brain:	n/a
17	chr8:53627208-53627258	AoSMC	blood vessel:	n/a
18	chr8:53627203-53627253	AG04450	lung:	fetal
19	chr8:53627203-53627253	NH-A	brain:	n/a
20	chr8:53627208-53627258	IMR90	lung:	fetal
21	chr8:53627208-53627258	CMK	blood:	n/a
22	chr8:53627203-53627253	AG10803	skin:	n/a
23	chr8:53627203-53627253	U87	brain:	n/a
24	chr8:53627203-53627253	BE2_C	brain:	n/a
25	chr8:53627208-53627258	RPTEC	kidney:	n/a
26	chr8:53627208-53627258	AG04450	lung:	fetal
27	chr8:53627208-53627258	MCF-7	breast:	n/a
28	chr8:53627208-53627258	HCF	heart:	n/a
29	chr8:53627208-53627258	HEEpiC	esophagus:	n/a
30	chr8:53627203-53627253	HAEpiC	amniotic membrane:	n/a
31	chr8:53627203-53627253	NHBE	bronchial:	n/a
32	chr8:53627208-53627258	HIPEpiC	eye:	n/a
33	chr8:53627208-53627258	Hepatocyte	liver:	n/a
34	chr8:53627203-53627253	ovcar-3	ovarian:	n/a
35	chr8:53627208-53627258	PrEC	prostate:	n/a
36	chr8:53627208-53627258	AG04449	skin:	fetal
37	chr8:53627208-53627258	GM19239	blood:	n/a
38	chr8:53627208-53627258	HRCEpiC	kidney:	n/a
39	chr8:53627203-53627253	HCT-116	colon:	n/a
40	chr8:53627203-53627253	Caco-2	colon:	n/a
41	chr8:53627203-53627253	GM12891	blood:	n/a
42	chr8:53627203-53627253	AG09319	gingival:	n/a
43	chr8:53627208-53627258	AG09319	gingival:	n/a
44	chr8:53627203-53627253	PFSK-1	brain:	n/a
45	chr8:53627208-53627258	A549	lung:	n/a
46	chr8:53627208-53627258	BE2_C	brain:	n/a
47	chr8:53627203-53627253	ProgFib	skin:	n/a
48	chr8:53627208-53627258	BJ	skin:	n/a
49	chr8:53627203-53627253	HUVEC	blood vessel:	n/a
50	chr8:53627208-53627258	GM06990	blood:	n/a

No.	Distal block	Cell Line	Cell type
1	chr1:155903764..155904566-chr8:53627083..53627730,2	Hela-S3	cervix:
2	chr17:7387307..7388046-chr8:53626887..53627456,2	NB4	blood:
3	chr8:53624816..53627483-chr8:54753343..54757526,4	K562	blood:
4	chr8:53626108..53628478-chr8:53633799..53636381,3	K562	blood:
5	chr14:34420140..34420761-chr8:53626495..53627269,2	Hela-S3	cervix:
6	chr11:72525205..72525843-chr8:53626563..53627501,2	HCT-116	colon:
7	chr8:53606661..53608813-chr8:53627240..53629943,2	MCF-7	breast:
8	chr8:53625356..53632251-chr8:53632429..53638796,8	K562	blood:

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-NPBWR1-4	chr8:53627118-53631645	NONHSAT126571

Variant related genes	Relation type
RB1CC1	TF binding region
RB1CC1	CpG island
ENSG00000181222	Chromatin interaction
ENSG00000271555	Chromatin interaction
ENSG00000132680	Chromatin interaction
ENSG00000047249	Chromatin interaction
ENSG00000174282	Chromatin interaction
ENSG00000168010	Chromatin interaction
ENSG00000129521	Chromatin interaction

Extended variants
information (count: 101 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:59)

rs_ID	r²[population]
rs16918011	0.82[ASW][hapmap];1.00[LWK][hapmap];0.83[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs16918013	0.82[ASW][hapmap];1.00[LWK][hapmap];0.81[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs16918014	0.82[ASW][hapmap];1.00[LWK][hapmap];0.86[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs16918017	1.00[AMR][1000 genomes]
rs16918031	1.00[AMR][1000 genomes]
rs16918043	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs16918044	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs16918045	1.00[AMR][1000 genomes]
rs16918047	1.00[AMR][1000 genomes]
rs16918048	1.00[LWK][hapmap];1.00[AMR][1000 genomes]
rs16918050	1.00[AMR][1000 genomes]
rs16918055	1.00[AMR][1000 genomes]
rs16918059	0.82[ASW][hapmap];1.00[LWK][hapmap];0.86[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs16918063	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs16918075	1.00[LWK][hapmap]
rs16918079	0.82[LWK][hapmap];1.00[AMR][1000 genomes]
rs16918087	1.00[LWK][hapmap];1.00[AMR][1000 genomes]
rs16918088	1.00[AMR][1000 genomes]
rs16918091	1.00[AMR][1000 genomes]
rs16918100	1.00[AMR][1000 genomes]
rs16918102	1.00[AMR][1000 genomes]
rs16918104	1.00[AMR][1000 genomes]
rs16918116	1.00[AMR][1000 genomes]
rs16918127	1.00[AMR][1000 genomes]
rs16918130	1.00[AMR][1000 genomes]
rs16918191	1.00[AMR][1000 genomes]
rs16918193	1.00[AMR][1000 genomes]
rs16918219	1.00[AMR][1000 genomes]
rs16919904	1.00[AMR][1000 genomes]
rs34250916	1.00[CEU][hapmap]
rs34500254	1.00[AMR][1000 genomes]
rs34711632	1.00[AMR][1000 genomes]
rs34888689	1.00[AMR][1000 genomes]
rs4317592	1.00[AMR][1000 genomes]
rs55932629	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs56261621	1.00[AMR][1000 genomes]
rs56663043	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs56945349	1.00[AMR][1000 genomes]
rs56989187	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs57282243	1.00[AMR][1000 genomes]
rs57349744	1.00[AMR][1000 genomes]
rs57452480	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs57896620	1.00[AMR][1000 genomes]
rs58551691	1.00[AMR][1000 genomes]
rs58631394	1.00[AMR][1000 genomes]
rs58812807	1.00[AMR][1000 genomes]
rs59023670	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs59283387	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs59654736	1.00[AMR][1000 genomes]
rs60679543	1.00[AMR][1000 genomes]
rs60886984	1.00[AMR][1000 genomes]
rs6984267	1.00[AMR][1000 genomes]
rs6984473	1.00[AMR][1000 genomes]
rs6997170	1.00[AMR][1000 genomes]
rs6997201	1.00[AMR][1000 genomes]
rs6997334	1.00[AMR][1000 genomes]
rs6998364	1.00[AMR][1000 genomes]
rs7820553	1.00[AMR][1000 genomes]
rs896634	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:42 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv817380	chr8:53207304-54016570	Bivalent Enhancer Weak transcription Active TSS Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Strong transcription Genic enhancers Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	24 gene(s)	inside rSNPs	diseases
2	nsv917043	chr8:53299833-53856743	Bivalent/Poised TSS Enhancers Flanking Active TSS Weak transcription Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Strong transcription Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	20 gene(s)	inside rSNPs	diseases
3	nsv917309	chr8:53299908-53898571	Enhancers Weak transcription Strong transcription Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS Genic enhancers Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	21 gene(s)	inside rSNPs	diseases
4	nsv1026748	chr8:53300989-53917456	Flanking Bivalent TSS/Enh Flanking Active TSS Strong transcription Enhancers Weak transcription Bivalent/Poised TSS Bivalent Enhancer Active TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	22 gene(s)	inside rSNPs	diseases
5	nsv1034284	chr8:53302090-53919610	Enhancers Weak transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS Strong transcription Active TSS Genic enhancers ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	22 gene(s)	inside rSNPs	diseases
6	nsv1019641	chr8:53320911-53917456	Weak transcription Flanking Active TSS Bivalent Enhancer Strong transcription Enhancers Flanking Bivalent TSS/Enh Active TSS ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	22 gene(s)	inside rSNPs	diseases
7	nsv539611	chr8:53320911-53917456	Genic enhancers Enhancers Weak transcription Flanking Bivalent TSS/Enh Strong transcription Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	22 gene(s)	inside rSNPs	diseases
8	nsv890902	chr8:53330582-53949560	Weak transcription Strong transcription Enhancers ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	22 gene(s)	inside rSNPs	diseases
9	nsv1032726	chr8:53332059-53766425	Enhancers Weak transcription Active TSS Strong transcription ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	20 gene(s)	inside rSNPs	diseases
10	nsv539612	chr8:53332059-53766425	Bivalent Enhancer Weak transcription Active TSS Strong transcription Enhancers Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	20 gene(s)	inside rSNPs	diseases
11	nsv1017736	chr8:53332059-53856829	Weak transcription Flanking Active TSS Strong transcription Enhancers ZNF genes & repeats Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	20 gene(s)	inside rSNPs	diseases
12	nsv539613	chr8:53332059-53856829	Bivalent Enhancer Enhancers Strong transcription Flanking Bivalent TSS/Enh ZNF genes & repeats Weak transcription Flanking Active TSS Active TSS Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	20 gene(s)	inside rSNPs	diseases
13	nsv1017130	chr8:53352941-53861955	Weak transcription Flanking Bivalent TSS/Enh Active TSS Enhancers Strong transcription Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	20 gene(s)	inside rSNPs	diseases
14	nsv1033618	chr8:53358820-53824589	Weak transcription Enhancers Active TSS Bivalent/Poised TSS Bivalent Enhancer Strong transcription Flanking Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	20 gene(s)	inside rSNPs	diseases
15	nsv539614	chr8:53358820-53824589	Strong transcription Enhancers Flanking Active TSS Active TSS Weak transcription Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	20 gene(s)	inside rSNPs	diseases
16	nsv1019474	chr8:53358820-53855933	Enhancers Weak transcription Strong transcription Bivalent/Poised TSS Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	20 gene(s)	inside rSNPs	diseases
17	nsv539615	chr8:53358820-53855933	Strong transcription Active TSS Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	20 gene(s)	inside rSNPs	diseases
18	nsv1023921	chr8:53358820-53917456	Enhancers Weak transcription Bivalent/Poised TSS Bivalent Enhancer Strong transcription Flanking Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3' Active TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	22 gene(s)	inside rSNPs	diseases
19	nsv539616	chr8:53358820-53917456	Weak transcription Enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS Strong transcription ZNF genes & repeats Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	22 gene(s)	inside rSNPs	diseases
20	esv2764065	chr8:53364649-53887932	Weak transcription Strong transcription Enhancers Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS ZNF genes & repeats Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	20 gene(s)	inside rSNPs	diseases
21	nsv890904	chr8:53388439-53727578	Active TSS Weak transcription Enhancers Strong transcription Bivalent Enhancer ZNF genes & repeats Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	16 gene(s)	inside rSNPs	diseases
22	nsv1023704	chr8:53389814-53832663	Weak transcription Strong transcription Enhancers Flanking Active TSS Active TSS ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	16 gene(s)	inside rSNPs	diseases
23	nsv1022250	chr8:53401100-53790746	Flanking Active TSS Weak transcription Active TSS Enhancers Strong transcription Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	16 gene(s)	inside rSNPs	diseases
24	nsv611355	chr8:53402811-53689112	Flanking Active TSS Strong transcription Enhancers Active TSS Weak transcription Bivalent Enhancer Bivalent/Poised TSS Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	16 gene(s)	inside rSNPs	diseases
25	nsv890905	chr8:53406508-53768651	Weak transcription Strong transcription Enhancers Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	16 gene(s)	inside rSNPs	diseases
26	nsv915643	chr8:53426209-53734930	Weak transcription Strong transcription Enhancers Flanking Active TSS Bivalent Enhancer Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	16 gene(s)	inside rSNPs	diseases
27	nsv1028061	chr8:53433836-53748168	Weak transcription ZNF genes & repeats Strong transcription Active TSS Enhancers Bivalent/Poised TSS Flanking Active TSS Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	16 gene(s)	inside rSNPs	diseases
28	nsv1020817	chr8:53433836-53790746	Weak transcription Enhancers ZNF genes & repeats Genic enhancers Strong transcription Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	16 gene(s)	inside rSNPs	diseases
29	nsv1024812	chr8:53456696-53748168	Weak transcription Enhancers Strong transcription Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	16 gene(s)	inside rSNPs	diseases
30	nsv539617	chr8:53456696-53748168	Strong transcription Flanking Active TSS Weak transcription Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh Enhancers ZNF genes & repeats Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	16 gene(s)	inside rSNPs	diseases
31	nsv1017745	chr8:53488049-53716177	Genic enhancers Weak transcription Strong transcription Flanking Active TSS ZNF genes & repeats Enhancers Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	15 gene(s)	inside rSNPs	diseases
32	nsv1019462	chr8:53488049-53748168	Enhancers Strong transcription Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	15 gene(s)	inside rSNPs	diseases
33	nsv539618	chr8:53488049-53748168	Enhancers Active TSS Weak transcription Strong transcription Genic enhancers Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	15 gene(s)	inside rSNPs	diseases
34	nsv1017408	chr8:53488049-54047869	Weak transcription Flanking Active TSS Bivalent Enhancer Enhancers Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Active TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	18 gene(s)	inside rSNPs	diseases
35	nsv539619	chr8:53488049-54047869	Enhancers Strong transcription Weak transcription Flanking Bivalent TSS/Enh ZNF genes & repeats Active TSS Flanking Active TSS Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	18 gene(s)	inside rSNPs	diseases
36	nsv1031365	chr8:53492861-53722584	Weak transcription Flanking Active TSS Enhancers Strong transcription ZNF genes & repeats Active TSS Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	15 gene(s)	inside rSNPs	diseases
37	nsv1027315	chr8:53503817-53706529	Active TSS Weak transcription Enhancers Strong transcription ZNF genes & repeats Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	15 gene(s)	inside rSNPs	diseases
38	nsv831318	chr8:53538599-53723687	Weak transcription Enhancers Flanking Active TSS Strong transcription Genic enhancers ZNF genes & repeats Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	15 gene(s)	inside rSNPs	diseases
39	nsv429916	chr8:53561892-53833571	Enhancers Strong transcription Weak transcription Active TSS Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	15 gene(s)	inside rSNPs	diseases
40	nsv1027416	chr8:53594176-53748168	Enhancers Genic enhancers Flanking Active TSS Active TSS Weak transcription ZNF genes & repeats Strong transcription Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	15 gene(s)	inside rSNPs	diseases
41	nsv949365	chr8:53603859-53831282	Weak transcription Flanking Active TSS Enhancers Active TSS ZNF genes & repeats Genic enhancers Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	15 gene(s)	inside rSNPs	diseases
42	nsv890908	chr8:53605442-53973180	Enhancers Weak transcription Flanking Active TSS Bivalent/Poised TSS Strong transcription Bivalent Enhancer Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	18 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:127 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:53624600-53628000	Active TSS	Breast Myoepithelial Primary Cells	Breast
2	chr8:53624600-53628400	Active TSS	Psoas Muscle	Psoas
3	chr8:53624600-53629400	Active TSS	Right Atrium	heart
4	chr8:53624800-53628200	Active TSS	K562	blood
5	chr8:53625200-53627600	Active TSS	HSMMtube	muscle
6	chr8:53625200-53628000	Active TSS	Aorta	Aorta
7	chr8:53625200-53628000	Active TSS	NHLF	lung
8	chr8:53625200-53628200	Active TSS	ES-I3 Cell Line	embryonic stem cell
9	chr8:53625200-53628400	Active TSS	H1 Cell Line	embryonic stem cell
10	chr8:53625200-53628600	Active TSS	IMR90 fetal lung fibroblasts Cell Line	lung
11	chr8:53625200-53629600	Active TSS	Right Ventricle	heart
12	chr8:53625400-53627600	Active TSS	Stomach Smooth Muscle	stomach
13	chr8:53625400-53627800	Active TSS	Ovary	ovary
14	chr8:53625400-53627800	Active TSS	Thymus	Thymus
15	chr8:53625400-53628000	Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
16	chr8:53625400-53628000	Active TSS	Pancreatic Islets	Pancreatic Islet
17	chr8:53625400-53628400	Active TSS	Foreskin Melanocyte Primary Cells skin01	Skin
18	chr8:53625600-53627600	Active TSS	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
19	chr8:53625600-53627600	Active TSS	H9 Derived Neuron Cultured Cells	ES cell derived
20	chr8:53625600-53627600	Active TSS	Primary T helper naive cells from peripheral blood	blood
21	chr8:53625600-53627600	Active TSS	Primary T killer memory cells from peripheral blood	blood
22	chr8:53625600-53627600	Active TSS	Colon Smooth Muscle	Colon
23	chr8:53625600-53627600	Active TSS	Fetal Intestine Small	intestine
24	chr8:53625600-53627600	Active TSS	Fetal Stomach	stomach
25	chr8:53625600-53627600	Active TSS	Fetal Thymus	thymus
26	chr8:53625600-53627600	Active TSS	Stomach Mucosa	stomach
27	chr8:53625600-53627600	Active TSS	Osteobl	bone
28	chr8:53625600-53627800	Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
29	chr8:53625600-53627800	Active TSS	Pancreas	Pancrea
30	chr8:53625600-53628000	Active TSS	H9 Cell Line	embryonic stem cell
31	chr8:53625600-53628000	Active TSS	iPS DF 6.9 Cell Line	embryonic stem cell
32	chr8:53625600-53628000	Flanking Active TSS	Primary mononuclear cells fromperipheralblood	Blood
33	chr8:53625600-53628000	Active TSS	Colonic Mucosa	Colon
34	chr8:53625600-53628000	Active TSS	Fetal Muscle Trunk	muscle
35	chr8:53625600-53628000	Active TSS	Left Ventricle	heart
36	chr8:53625600-53628000	Active TSS	A549	lung
37	chr8:53625600-53628000	Active TSS	HSMM	muscle
38	chr8:53625600-53628000	Active TSS	NHDF-Ad	bronchial
39	chr8:53625600-53628200	Active TSS	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
40	chr8:53625600-53628200	Active TSS	Duodenum Mucosa	Duodenum
41	chr8:53625600-53628200	Active TSS	HMEC	breast
42	chr8:53625600-53628600	Active TSS	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
43	chr8:53625600-53628600	Active TSS	iPS-20b Cell Line	embryonic stem cell
44	chr8:53625600-53628600	Active TSS	GM12878-XiMat	blood
45	chr8:53625800-53627400	Active TSS	Primary T helper memory cells from peripheral blood 1	blood
46	chr8:53625800-53627400	Active TSS	Brain Dorsolateral Prefrontal Cortex	brain
47	chr8:53625800-53627400	Active TSS	Placenta	Placenta
48	chr8:53625800-53627600	Active TSS	Primary T helper memory cells from peripheral blood 2	blood
49	chr8:53625800-53627600	Active TSS	Primary T helper cells PMA-I stimulated	--
50	chr8:53625800-53627600	Active TSS	Primary T killer naive cells fromperipheralblood	blood

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