Variant report

Variant	rs187399077
Chromosome Location	chr6:150261912-150261913
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:2)
CpG islands
(count:0)
Chromatin interactive
region (count:3)
LncRNA
region (count:3)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:2 , 50 per page) page: 1

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	CTCF	chr6:150261860-150262010	HepG2	liver:	n/a	n/a
2	SUZ12	chr6:150261103-150262100	H1-hESC	embryonic stem cell:	n/a	n/a

No data

(count:3 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr6:150255655..150257664-chr6:150259479..150262477,4	K562	blood:
2	chr6:150255165..150257260-chr6:150258635..150261924,3	MCF-7	breast:
3	chr6:150254783..150257862-chr6:150259479..150262603,4	K562	blood:

(count:3 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-ULBP2-1	chr6:150261044-150262631	XLOC_005501
2	lnc-ULBP2-1	chr6:150261044-150262631	XLOC_005501
3	lnc-ULBP2-1	chr6:150261044-150262766	NONHSAT115525

No data

Variant related genes	Relation type
ULBP2	TF binding region
ENSG00000216621	Chromatin interaction

Extended variants
information (count: 6 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:6 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv886764	chr6:150114745-150393683	Weak transcription Bivalent Enhancer Flanking Active TSS Enhancers Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Strong transcription Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	40 gene(s)	inside rSNPs	diseases
2	nsv517022	chr6:150145001-150426272	Bivalent Enhancer Weak transcription Flanking Bivalent TSS/Enh Strong transcription Enhancers Bivalent/Poised TSS Active TSS Flanking Active TSS ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	39 gene(s)	inside rSNPs	diseases
3	nsv886765	chr6:150198491-150288722	Bivalent/Poised TSS Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh Enhancers Weak transcription Active TSS ZNF genes & repeats Genic enhancers Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	21 gene(s)	inside rSNPs	diseases
4	esv1817805	chr6:150209592-150268708	Enhancers Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS Bivalent/Poised TSS Weak transcription ZNF genes & repeats Genic enhancers Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	18 gene(s)	inside rSNPs	diseases
5	esv3332714	chr6:150259037-150275045	Weak transcription Enhancers Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Flanking Active TSS Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	8 gene(s)	inside rSNPs	diseases
6	nsv970173	chr6:150261095-150262064	Bivalent Enhancer Bivalent/Poised TSS Enhancers Weak transcription Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:26 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:150260200-150262600	Bivalent Enhancer	Primary Natural Killer cells fromperipheralblood	blood
2	chr6:150260400-150262200	Bivalent Enhancer	Primary T helper naive cells from peripheral blood	blood
3	chr6:150260400-150262400	Bivalent Enhancer	Primary T helper cells fromperipheralblood	blood
4	chr6:150260400-150262600	Weak transcription	Right Atrium	heart
5	chr6:150260400-150262600	Weak transcription	HMEC	breast
6	chr6:150260600-150262200	Bivalent Enhancer	Primary T helper cells PMA-I stimulated	--
7	chr6:150260600-150262400	Weak transcription	Pancreas	Pancrea
8	chr6:150260600-150262400	Weak transcription	Right Ventricle	heart
9	chr6:150260800-150262400	Bivalent Enhancer	Primary T helper 17 cells PMA-I stimulated	--
10	chr6:150261400-150262400	Bivalent Enhancer	Fetal Muscle Trunk	muscle
11	chr6:150261400-150264000	Bivalent/Poised TSS	iPS-15b Cell Line	embryonic stem cell
12	chr6:150261600-150262200	Bivalent Enhancer	Primary T killer naive cells fromperipheralblood	blood
13	chr6:150261600-150262400	Bivalent Enhancer	Primary T helper naive cells fromperipheralblood	blood
14	chr6:150261600-150262600	Bivalent Enhancer	Primary B cells from peripheral blood	blood
15	chr6:150261800-150262000	Bivalent Enhancer	H1 Derived Mesenchymal Stem Cells	ES cell derived
16	chr6:150261800-150262000	Bivalent Enhancer	Foreskin Fibroblast Primary Cells skin01	Skin
17	chr6:150261800-150262200	Bivalent Enhancer	Primary T killer memory cells from peripheral blood	blood
18	chr6:150261800-150262200	Bivalent Enhancer	Brain Dorsolateral Prefrontal Cortex	brain
19	chr6:150261800-150262400	Bivalent Enhancer	Primary T helper memory cells from peripheral blood 2	blood
20	chr6:150261800-150262400	Bivalent Enhancer	Primary T regulatory cells fromperipheralblood	blood
21	chr6:150261800-150262400	Enhancers	Primary T cells effector/memory enriched fromperipheralblood	blood
22	chr6:150261800-150262400	Bivalent Enhancer	Primary hematopoietic stem cells G-CSF-mobilized Male	--
23	chr6:150261800-150262600	Bivalent Enhancer	Primary monocytes fromperipheralblood	blood
24	chr6:150261800-150262600	Bivalent Enhancer	Primary T cells fromperipheralblood	blood
25	chr6:150261800-150262600	Bivalent Enhancer	Monocytes-CD14+_RO01746	blood
26	chr6:150261800-150263200	Active TSS	Foreskin Fibroblast Primary Cells skin02	Skin

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