Variant report

Variant rs187587598
Chromosome Location chr3:119890682-119890683
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:43 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:119875200-119896000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
2 chr3:119883200-119895800 Weak transcription Fetal Intestine Small intestine
3 chr3:119884800-119895600 Weak transcription Brain Germinal Matrix brain
4 chr3:119885000-119895800 Weak transcription Fetal Lung lung
5 chr3:119886200-119892400 Strong transcription Fetal Brain Female brain
6 chr3:119887200-119895800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
7 chr3:119887800-119891400 Enhancers NHEK skin
8 chr3:119888000-119891400 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
9 chr3:119888000-119891400 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
10 chr3:119888200-119891200 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
11 chr3:119888200-119891200 Enhancers HMEC breast
12 chr3:119888400-119892600 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
13 chr3:119888400-119895800 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
14 chr3:119888400-119895800 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
15 chr3:119888400-119896200 Enhancers NHDF-Ad bronchial
16 chr3:119888600-119891600 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
17 chr3:119888600-119892200 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
18 chr3:119888600-119892600 Enhancers Osteobl bone
19 chr3:119888600-119893200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
20 chr3:119888600-119896000 Enhancers Muscle Satellite Cultured Cells --
21 chr3:119888800-119891400 Enhancers NHLF lung
22 chr3:119889400-119891200 Enhancers Fetal Muscle Leg muscle
23 chr3:119889400-119893600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
24 chr3:119889600-119890800 Enhancers Breast Myoepithelial Primary Cells Breast
25 chr3:119890000-119891400 Enhancers Lung lung
26 chr3:119890000-119892000 Weak transcription HSMM muscle
27 chr3:119890000-119893000 Weak transcription A549 lung
28 chr3:119890000-119895800 Weak transcription Pancreatic Islets Pancreatic Islet
29 chr3:119890200-119891000 Enhancers Colon Smooth Muscle Colon
30 chr3:119890200-119891400 Enhancers Fetal Thymus thymus
31 chr3:119890200-119892200 Strong transcription Fetal Stomach stomach
32 chr3:119890400-119891200 Enhancers Adipose Nuclei Adipose
33 chr3:119890400-119891400 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
34 chr3:119890400-119891400 Weak transcription Esophagus oesophagus
35 chr3:119890400-119892000 Weak transcription HSMMtube muscle
36 chr3:119890400-119893600 Weak transcription Placenta Placenta
37 chr3:119890400-119895400 Weak transcription Psoas Muscle Psoas
38 chr3:119890400-119895800 Weak transcription Placenta Amnion Placenta Amnion
39 chr3:119890400-119895800 Weak transcription Skeletal Muscle Female skeletal muscle
40 chr3:119890600-119892200 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
41 chr3:119890600-119893600 Weak transcription Hela-S3 cervix
42 chr3:119890600-119895600 Weak transcription Skeletal Muscle Male skeletal muscle
43 chr3:119890600-119895800 Weak transcription Rectal Smooth Muscle rectum

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