Variant report
| Variant | rs1876863 |
|---|---|
| Chromosome Location | chr2:115846720-115846721 |
| allele | A/C |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
rSNPs within LD-proxies of this variant (count:35)
| rs_ID | r2[population] |
|---|---|
| rs10205094 | 0.85[AFR][1000 genomes] |
| rs11123276 | 0.84[AFR][1000 genomes] |
| rs11123280 | 0.82[AFR][1000 genomes] |
| rs12612601 | 0.82[AFR][1000 genomes] |
| rs1396927 | 0.86[AFR][1000 genomes] |
| rs1509741 | 0.86[AFR][1000 genomes] |
| rs17040479 | 0.82[AFR][1000 genomes] |
| rs17044031 | 0.84[AFR][1000 genomes] |
| rs1876862 | 0.86[AFR][1000 genomes] |
| rs2420590 | 0.85[AFR][1000 genomes] |
| rs4848379 | 0.82[AFR][1000 genomes] |
| rs4848380 | 0.81[AFR][1000 genomes] |
| rs55851152 | 0.82[AFR][1000 genomes] |
| rs56073672 | 0.82[AFR][1000 genomes] |
| rs58962358 | 0.82[AFR][1000 genomes];0.81[AMR][1000 genomes];0.85[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs59975834 | 0.89[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs60483323 | 0.82[AFR][1000 genomes] |
| rs61317284 | 0.81[AFR][1000 genomes] |
| rs66504724 | 0.85[AFR][1000 genomes] |
| rs6720237 | 0.85[AFR][1000 genomes] |
| rs6722193 | 0.85[AFR][1000 genomes] |
| rs67448492 | 0.81[AFR][1000 genomes] |
| rs6757573 | 0.84[AFR][1000 genomes] |
| rs6759370 | 0.85[AFR][1000 genomes] |
| rs73946513 | 0.82[AFR][1000 genomes] |
| rs7560260 | 0.82[AFR][1000 genomes] |
| rs7574885 | 0.82[AFR][1000 genomes] |
| rs7575500 | 0.85[AFR][1000 genomes] |
| rs7575677 | 0.81[AFR][1000 genomes] |
| rs7582562 | 0.82[AFR][1000 genomes] |
| rs7584663 | 0.82[AFR][1000 genomes] |
| rs7595736 | 0.85[AFR][1000 genomes] |
| rs958396 | 0.86[AFR][1000 genomes] |
| rs9917121 | 0.82[AFR][1000 genomes] |
| rs9917329 | 0.84[AFR][1000 genomes] |
| No data |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr2:115843200-115849800 | ZNF genes & repeats | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
