Variant report

Variant	rs187900
Chromosome Location	chr10:44567765-44567766
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 13 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:13)

rs_ID	r²[population]
rs11238840	1.00[ASN][1000 genomes]
rs1254530	0.84[AFR][1000 genomes];0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1254531	0.87[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs182075	0.81[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs182076	0.86[ASN][1000 genomes]
rs187901	0.86[ASN][1000 genomes]
rs1938557	0.82[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs268312	0.86[ASN][1000 genomes]
rs268313	0.86[ASN][1000 genomes]
rs268319	0.86[ASN][1000 genomes]
rs268321	0.84[ASN][1000 genomes]
rs268322	0.84[ASN][1000 genomes]
rs931225	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:44564000-44567800	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
2	chr10:44564000-44567800	Enhancers	NHDF-Ad	bronchial
3	chr10:44564400-44567800	Enhancers	Stomach Smooth Muscle	stomach
4	chr10:44564800-44568000	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
5	chr10:44566600-44567800	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
6	chr10:44566600-44568000	Enhancers	Osteobl	bone
7	chr10:44567000-44567800	Enhancers	Fetal Stomach	stomach
8	chr10:44567600-44568000	Enhancers	Rectal Smooth Muscle	rectum

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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