Variant report

Variant	rs1880360
Chromosome Location	chr6:82443765-82443766
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 8 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:8)

rs_ID	r²[population]
rs10943830	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11755998	1.00[AFR][1000 genomes];0.87[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13197381	0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16893674	1.00[ASW][hapmap]
rs17661047	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[AFR][1000 genomes];0.87[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs58539789	0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6911841	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7769744	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.87[TSI][hapmap];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:82422800-82451800	Weak transcription	Aorta	Aorta
2	chr6:82437800-82459400	Weak transcription	Pancreas	Pancrea
3	chr6:82442000-82445400	Weak transcription	NHDF-Ad	bronchial
4	chr6:82442000-82449600	Weak transcription	Placenta Amnion	Placenta Amnion
5	chr6:82442000-82455000	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
6	chr6:82442000-82456200	Weak transcription	Small Intestine	intestine
7	chr6:82442600-82454400	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
8	chr6:82442800-82447600	Weak transcription	Right Ventricle	heart
9	chr6:82443200-82449600	Weak transcription	Left Ventricle	heart

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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