Variant report

Variant rs188048736
Chromosome Location chr5:178750003-178750004
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:42 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:178742000-178758000 Weak transcription Colon Smooth Muscle Colon
2 chr5:178742800-178753000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
3 chr5:178746400-178758600 Weak transcription Gastric stomach
4 chr5:178746600-178752000 Weak transcription Right Atrium heart
5 chr5:178747000-178752200 Weak transcription Spleen Spleen
6 chr5:178747000-178752800 Weak transcription Pancreas Pancrea
7 chr5:178747000-178753600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
8 chr5:178747200-178752600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
9 chr5:178747400-178751000 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
10 chr5:178747400-178751200 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
11 chr5:178747400-178753000 Weak transcription ES-I3 Cell Line embryonic stem cell
12 chr5:178747400-178753600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
13 chr5:178747800-178752200 Weak transcription Ovary ovary
14 chr5:178747800-178758600 Weak transcription HSMM muscle
15 chr5:178748000-178753800 Weak transcription NHLF lung
16 chr5:178748000-178758000 Weak transcription HSMMtube muscle
17 chr5:178748200-178766600 Weak transcription Muscle Satellite Cultured Cells --
18 chr5:178748800-178750200 Enhancers Adipose Nuclei Adipose
19 chr5:178748800-178751000 Enhancers Fetal Muscle Leg muscle
20 chr5:178748800-178751200 Enhancers Fetal Lung lung
21 chr5:178749000-178750200 Enhancers NHDF-Ad bronchial
22 chr5:178749000-178750400 Enhancers Fetal Brain Male brain
23 chr5:178749200-178750800 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
24 chr5:178749400-178750400 Enhancers Breast Myoepithelial Primary Cells Breast
25 chr5:178749400-178750800 Enhancers Osteobl bone
26 chr5:178749400-178753800 Weak transcription Fetal Thymus thymus
27 chr5:178749600-178750200 Enhancers Skeletal Muscle Female skeletal muscle
28 chr5:178749600-178750400 Bivalent Enhancer Fetal Adrenal Gland Adrenal Gland
29 chr5:178749600-178750600 Enhancers Skeletal Muscle Male skeletal muscle
30 chr5:178749800-178750200 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
31 chr5:178749800-178750400 Flanking Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
32 chr5:178749800-178750400 ZNF genes & repeats Foreskin Melanocyte Primary Cells skin03 Skin
33 chr5:178749800-178751000 Enhancers Brain Germinal Matrix brain
34 chr5:178749800-178751000 Enhancers Fetal Heart heart
35 chr5:178749800-178752400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
36 chr5:178749800-178752600 Weak transcription Placenta Amnion Placenta Amnion
37 chr5:178750000-178750400 Weak transcription Fetal Brain Female brain
38 chr5:178750000-178750800 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
39 chr5:178750000-178751800 Enhancers Fetal Muscle Trunk muscle
40 chr5:178750000-178752200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
41 chr5:178750000-178752400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
42 chr5:178750000-178752400 Enhancers Fetal Stomach stomach

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