Variant report

Variant	rs1881724
Chromosome Location	chr7:148001261-148001262
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr7:147991733..147994671-chr7:148000792..148003295,3	K562	blood:

Extended variants
information (count: 3 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:1)

rs_ID	r²[population]
rs1529153	1.00[MEX][hapmap]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv428189	chr7:147885525-148051226	Weak transcription Flanking Active TSS Enhancers Genic enhancers Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
2	nsv1022510	chr7:147989695-148236252	Weak transcription Strong transcription Active TSS Enhancers Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	9 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:49 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:147994000-148001600	Weak transcription	Brain Cingulate Gyrus	brain
2	chr7:147998000-148001400	Weak transcription	HUES48 Cell Line	embryonic stem cell
3	chr7:147998000-148001600	Weak transcription	iPS-20b Cell Line	embryonic stem cell
4	chr7:147999000-148001600	Weak transcription	Fetal Muscle Leg	muscle
5	chr7:147999200-148001600	Weak transcription	Esophagus	oesophagus
6	chr7:147999600-148001600	Weak transcription	Stomach Mucosa	stomach
7	chr7:147999800-148001600	Weak transcription	Spleen	Spleen
8	chr7:148000200-148001600	Enhancers	Primary hematopoietic stem cells	blood
9	chr7:148000200-148002000	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
10	chr7:148000200-148002200	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
11	chr7:148000200-148002400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
12	chr7:148000200-148002800	Enhancers	Primary T helper cells PMA-I stimulated	--
13	chr7:148000400-148001600	Enhancers	GM12878-XiMat	blood
14	chr7:148000400-148001800	Enhancers	Rectal Mucosa Donor 29	rectum
15	chr7:148000400-148002000	Enhancers	Colon Smooth Muscle	Colon
16	chr7:148000400-148002000	Enhancers	Fetal Adrenal Gland	Adrenal Gland
17	chr7:148000400-148002000	Enhancers	Fetal Stomach	stomach
18	chr7:148000400-148002000	Enhancers	Skeletal Muscle Male	skeletal muscle
19	chr7:148000400-148002200	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
20	chr7:148000400-148002200	Enhancers	Brain Hippocampus Middle	brain
21	chr7:148000400-148002200	Enhancers	Ovary	ovary
22	chr7:148000400-148002600	Enhancers	Primary T helper cells fromperipheralblood	blood
23	chr7:148000400-148002800	Enhancers	Primary T helper naive cells from peripheral blood	blood
24	chr7:148000400-148003000	Enhancers	Primary hematopoietic stem cells short term culture	blood
25	chr7:148000600-148001400	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
26	chr7:148000600-148001400	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
27	chr7:148000600-148001800	Flanking Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
28	chr7:148000600-148002000	Enhancers	Duodenum Smooth Muscle	Duodenum
29	chr7:148000600-148002200	Flanking Active TSS	Primary B cells from cord blood	blood
30	chr7:148000600-148002200	Enhancers	Primary T killer memory cells from peripheral blood	blood
31	chr7:148000600-148002800	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
32	chr7:148000600-148002800	Weak transcription	Left Ventricle	heart
33	chr7:148000600-148003000	Enhancers	Primary T helper naive cells fromperipheralblood	blood
34	chr7:148000800-148001400	Enhancers	Primary B cells from peripheral blood	blood
35	chr7:148000800-148001800	Weak transcription	Brain Substantia Nigra	brain
36	chr7:148000800-148002600	Enhancers	HUES64 Cell Line	embryonic stem cell
37	chr7:148000800-148002600	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
38	chr7:148000800-148007400	Weak transcription	Brain Angular Gyrus	brain
39	chr7:148001000-148001400	Flanking Active TSS	Primary T cells from cord blood	blood
40	chr7:148001000-148001400	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
41	chr7:148001000-148002000	Enhancers	iPS-15b Cell Line	embryonic stem cell
42	chr7:148001000-148002000	Enhancers	iPS-18 Cell Line	embryonic stem cell
43	chr7:148001200-148001400	Flanking Active TSS	K562	blood
44	chr7:148001200-148001600	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
45	chr7:148001200-148001600	Weak transcription	HMEC	breast
46	chr7:148001200-148001800	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
47	chr7:148001200-148002000	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
48	chr7:148001200-148002000	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
49	chr7:148001200-148002800	Enhancers	Adipose Nuclei	Adipose

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