The 2.0 version of rSNPBase

Variant report

Variant rs1882105
Chromosome Location chr4:1345956-1345957
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:123 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:1341800-1346800 Weak transcription Aorta Aorta
2 chr4:1341800-1347000 Weak transcription Ovary ovary
3 chr4:1341800-1387800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr4:1341800-1388800 Weak transcription Small Intestine intestine
5 chr4:1342000-1351400 Weak transcription ES-I3 Cell Line embryonic stem cell
6 chr4:1342200-1346200 Weak transcription Placenta Amnion Placenta Amnion
7 chr4:1342200-1354200 Weak transcription NH-A brain
8 chr4:1342200-1359400 Weak transcription Right Atrium heart
9 chr4:1342200-1369800 Weak transcription HSMMtube muscle
10 chr4:1342200-1382600 Weak transcription Primary B cells from cord blood blood
11 chr4:1342400-1346000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
12 chr4:1342400-1346000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
13 chr4:1342400-1346200 Weak transcription Osteobl bone
14 chr4:1342400-1346800 Weak transcription Left Ventricle heart
15 chr4:1342400-1350400 Weak transcription iPS-20b Cell Line embryonic stem cell
16 chr4:1342400-1350600 Weak transcription Fetal Lung lung
17 chr4:1342400-1352600 Strong transcription NHLF lung
18 chr4:1342400-1370000 Weak transcription HSMM muscle
19 chr4:1342400-1379800 Weak transcription A549 lung
20 chr4:1342600-1346000 Weak transcription Rectal Smooth Muscle rectum
21 chr4:1342600-1346200 Weak transcription Liver Liver
22 chr4:1342600-1349400 Weak transcription K562 blood
23 chr4:1342600-1358400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
24 chr4:1342600-1367200 Weak transcription Hela-S3 cervix
25 chr4:1342600-1385600 Weak transcription Fetal Kidney kidney
26 chr4:1342800-1346000 Weak transcription H1 Cell Line embryonic stem cell
27 chr4:1342800-1346200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
28 chr4:1342800-1346200 Weak transcription Colon Smooth Muscle Colon
29 chr4:1342800-1353800 Weak transcription NHDF-Ad bronchial
30 chr4:1342800-1354600 Strong transcription NHEK skin
31 chr4:1342800-1360400 Weak transcription Psoas Muscle Psoas
32 chr4:1342800-1379800 Weak transcription Pancreatic Islets Pancreatic Islet
33 chr4:1342800-1381200 Strong transcription Fetal Intestine Small intestine
34 chr4:1343000-1347800 Strong transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
35 chr4:1343000-1354800 Weak transcription Primary hematopoietic stem cells blood
36 chr4:1343200-1354600 Strong transcription Fetal Stomach stomach
37 chr4:1343200-1354800 Strong transcription Sigmoid Colon Sigmoid Colon
38 chr4:1343400-1357600 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
39 chr4:1343400-1381200 Strong transcription Primary mononuclear cells fromperipheralblood Blood
40 chr4:1343600-1353400 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
41 chr4:1343800-1349600 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
42 chr4:1343800-1352000 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
43 chr4:1344000-1358000 Weak transcription HMEC breast
44 chr4:1344200-1346000 Weak transcription Cortex derived primary cultured neurospheres brain
45 chr4:1344200-1346600 Weak transcription Primary T cells from cord blood blood
46 chr4:1344200-1346800 Weak transcription Brain Germinal Matrix brain
47 chr4:1344200-1350400 Weak transcription Fetal Brain Male brain
48 chr4:1344400-1346000 Weak transcription HUES64 Cell Line embryonic stem cell
49 chr4:1344400-1346000 Enhancers Primary T helper cells PMA-I stimulated --
50 chr4:1344400-1346000 Weak transcription Lung lung

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Last update: Aug 31, 2015