Variant report

Variant rs2293630
Chromosome Location chr4:1342521-1342522
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:124 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:1339400-1342800 Active TSS Pancreatic Islets Pancreatic Islet
2 chr4:1341400-1342600 Flanking Active TSS Skeletal Muscle Male skeletal muscle
3 chr4:1341400-1342600 Flanking Active TSS Stomach Smooth Muscle stomach
4 chr4:1341400-1342600 Flanking Active TSS Monocytes-CD14+_RO01746 blood
5 chr4:1341400-1343200 Flanking Active TSS Dnd41 blood
6 chr4:1341600-1342600 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
7 chr4:1341600-1342600 Flanking Active TSS Muscle Satellite Cultured Cells --
8 chr4:1341800-1342600 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
9 chr4:1341800-1342800 Enhancers Primary T helper naive cells fromperipheralblood blood
10 chr4:1341800-1342800 Enhancers Primary Natural Killer cells fromperipheralblood blood
11 chr4:1341800-1342800 Enhancers Fetal Thymus thymus
12 chr4:1341800-1343000 Genic enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
13 chr4:1341800-1343000 Enhancers Sigmoid Colon Sigmoid Colon
14 chr4:1341800-1343000 Flanking Active TSS GM12878-XiMat blood
15 chr4:1341800-1343200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
16 chr4:1341800-1343200 Enhancers Pancreas Pancrea
17 chr4:1341800-1343400 Enhancers Gastric stomach
18 chr4:1341800-1343400 Enhancers Lung lung
19 chr4:1341800-1346800 Weak transcription Aorta Aorta
20 chr4:1341800-1347000 Weak transcription Ovary ovary
21 chr4:1341800-1387800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
22 chr4:1341800-1388800 Weak transcription Small Intestine intestine
23 chr4:1342000-1342600 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
24 chr4:1342000-1342600 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
25 chr4:1342000-1342600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
26 chr4:1342000-1342600 Enhancers Primary B cells from peripheral blood blood
27 chr4:1342000-1342600 Enhancers Primary T helper cells PMA-I stimulated --
28 chr4:1342000-1342600 Enhancers Primary T helper 17 cells PMA-I stimulated --
29 chr4:1342000-1342600 Transcr. at gene 5' and 3' Foreskin Keratinocyte Primary Cells skin03 Skin
30 chr4:1342000-1342600 Enhancers Fetal Kidney kidney
31 chr4:1342000-1342600 Enhancers Fetal Stomach stomach
32 chr4:1342000-1342800 Enhancers Primary monocytes fromperipheralblood blood
33 chr4:1342000-1342800 Flanking Active TSS Foreskin Melanocyte Primary Cells skin01 Skin
34 chr4:1342000-1342800 Enhancers Fetal Intestine Large intestine
35 chr4:1342000-1342800 Enhancers Fetal Muscle Leg muscle
36 chr4:1342000-1342800 Enhancers Rectal Mucosa Donor 29 rectum
37 chr4:1342000-1342800 Enhancers Right Ventricle heart
38 chr4:1342000-1342800 Flanking Active TSS HepG2 liver
39 chr4:1342000-1343000 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
40 chr4:1342000-1343000 Enhancers ES-UCSF4 Cell Line embryonic stem cell
41 chr4:1342000-1343000 Enhancers Brain Substantia Nigra brain
42 chr4:1342000-1343200 Enhancers Brain Cingulate Gyrus brain
43 chr4:1342000-1343200 Enhancers Brain Germinal Matrix brain
44 chr4:1342000-1343200 Enhancers Fetal Muscle Trunk muscle
45 chr4:1342000-1343400 Enhancers Brain Dorsolateral Prefrontal Cortex brain
46 chr4:1342000-1343400 Enhancers Fetal Adrenal Gland Adrenal Gland
47 chr4:1342000-1343600 Enhancers Placenta Placenta
48 chr4:1342000-1343800 Transcr. at gene 5' and 3' Foreskin Fibroblast Primary Cells skin01 Skin
49 chr4:1342000-1343800 Enhancers Stomach Mucosa stomach
50 chr4:1342000-1344200 Enhancers Fetal Brain Male brain

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