Variant report
| Variant | rs1883879 |
|---|---|
| Chromosome Location | chr6:80386932-80386933 |
| allele | C/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr6:80373400-80412400 | Weak transcription | Fetal Brain Male | brain |
| 2 | chr6:80376400-80396200 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
| 3 | chr6:80376400-80402000 | Weak transcription | Brain Substantia Nigra | brain |
| 4 | chr6:80378000-80394400 | Weak transcription | iPS-18 Cell Line | embryonic stem cell |
| 5 | chr6:80378200-80387000 | Weak transcription | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
| 6 | chr6:80378200-80396000 | Weak transcription | Brain Inferior Temporal Lobe | brain |
| 7 | chr6:80378200-80405000 | Weak transcription | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
| 8 | chr6:80378400-80403800 | Weak transcription | Esophagus | oesophagus |
| 9 | chr6:80381200-80390000 | Weak transcription | Rectal Smooth Muscle | rectum |
| 10 | chr6:80381600-80387000 | Weak transcription | Colon Smooth Muscle | Colon |
| 11 | chr6:80381600-80387200 | Weak transcription | Left Ventricle | heart |
| 12 | chr6:80381600-80387200 | Weak transcription | Ovary | ovary |
| 13 | chr6:80381600-80388600 | Weak transcription | Skeletal Muscle Female | skeletal muscle |
| 14 | chr6:80381600-80390400 | Weak transcription | Primary hematopoietic stem cells | blood |
| 15 | chr6:80381600-80396400 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 16 | chr6:80381600-80400600 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 17 | chr6:80381600-80408200 | Weak transcription | Fetal Stomach | stomach |
| 18 | chr6:80381800-80387000 | Weak transcription | Brain Cingulate Gyrus | brain |
| 19 | chr6:80381800-80395800 | Weak transcription | Placenta Amnion | Placenta Amnion |
| 20 | chr6:80382000-80394200 | Weak transcription | Small Intestine | intestine |
| 21 | chr6:80382200-80387200 | Weak transcription | Aorta | Aorta |
| 22 | chr6:80382200-80411800 | Weak transcription | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 23 | chr6:80382400-80387000 | Weak transcription | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
| 24 | chr6:80382400-80396600 | Weak transcription | Fetal Lung | lung |
| 25 | chr6:80382600-80391400 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 26 | chr6:80382600-80414800 | Weak transcription | HUVEC | blood vessel |
| 27 | chr6:80382800-80388000 | Weak transcription | HUES6 Cell Line | embryonic stem cell |
| 28 | chr6:80382800-80396400 | Weak transcription | iPS-15b Cell Line | embryonic stem cell |
| 29 | chr6:80382800-80413000 | Weak transcription | Placenta | Placenta |
| 30 | chr6:80382800-80414000 | Weak transcription | HSMM | muscle |
| 31 | chr6:80383800-80393600 | Weak transcription | Fetal Adrenal Gland | Adrenal Gland |
| 32 | chr6:80383800-80396400 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 33 | chr6:80383800-80396400 | Weak transcription | K562 | blood |
| 34 | chr6:80384200-80395800 | Weak transcription | HUES64 Cell Line | embryonic stem cell |
| 35 | chr6:80384200-80406200 | Weak transcription | iPS-20b Cell Line | embryonic stem cell |
| 36 | chr6:80384400-80395800 | Weak transcription | Adipose Nuclei | Adipose |
| 37 | chr6:80384600-80387000 | Weak transcription | Brain Anterior Caudate | brain |
| 38 | chr6:80384600-80387200 | Weak transcription | Brain Hippocampus Middle | brain |
| 39 | chr6:80384600-80387800 | Weak transcription | Brain Germinal Matrix | brain |
| 40 | chr6:80384600-80396400 | Weak transcription | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 41 | chr6:80384600-80396400 | Weak transcription | Rectal Mucosa Donor 29 | rectum |
| 42 | chr6:80384600-80397000 | Weak transcription | Brain Angular Gyrus | brain |
| 43 | chr6:80384600-80405600 | Weak transcription | Fetal Kidney | kidney |
| 44 | chr6:80385000-80388600 | Weak transcription | Fetal Brain Female | brain |
| 45 | chr6:80385000-80392000 | Weak transcription | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 46 | chr6:80385000-80394800 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
| 47 | chr6:80385200-80388400 | Weak transcription | Breast Myoepithelial Primary Cells | Breast |
| 48 | chr6:80385400-80396600 | Weak transcription | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
| 49 | chr6:80385600-80387000 | Enhancers | Stomach Mucosa | stomach |
| 50 | chr6:80385800-80387400 | Enhancers | Liver | Liver |
