Variant report

Variant rs3812155
Chromosome Location chr6:80340895-80340896
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:124 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:80339000-80341000 Weak transcription Small Intestine intestine
2 chr6:80340000-80342000 Active TSS Pancreatic Islets Pancreatic Islet
3 chr6:80340200-80341000 Bivalent/Poised TSS ES-I3 Cell Line embryonic stem cell
4 chr6:80340200-80341000 Bivalent/Poised TSS iPS-18 Cell Line embryonic stem cell
5 chr6:80340200-80341800 Active TSS Brain Germinal Matrix brain
6 chr6:80340200-80341800 Bivalent/Poised TSS A549 lung
7 chr6:80340200-80342000 Active TSS ES-UCSF4 Cell Line embryonic stem cell
8 chr6:80340200-80342600 Active TSS Rectal Smooth Muscle rectum
9 chr6:80340200-80343200 Active TSS Duodenum Mucosa Duodenum
10 chr6:80340200-80344400 Active TSS Brain Angular Gyrus brain
11 chr6:80340400-80341000 Flanking Bivalent TSS/Enh Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
12 chr6:80340400-80341000 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
13 chr6:80340400-80341000 Flanking Bivalent TSS/Enh Foreskin Fibroblast Primary Cells skin02 Skin
14 chr6:80340400-80341000 Flanking Active TSS Adipose Nuclei Adipose
15 chr6:80340400-80341000 Active TSS Duodenum Smooth Muscle Duodenum
16 chr6:80340400-80341200 Flanking Active TSS Primary hematopoietic stem cells blood
17 chr6:80340400-80341200 Active TSS Hela-S3 cervix
18 chr6:80340400-80341400 Active TSS Foreskin Melanocyte Primary Cells skin01 Skin
19 chr6:80340400-80341600 Bivalent/Poised TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
20 chr6:80340400-80341600 Flanking Bivalent TSS/Enh Cortex derived primary cultured neurospheres brain
21 chr6:80340400-80341600 Active TSS Placenta Amnion Placenta Amnion
22 chr6:80340400-80341600 Bivalent/Poised TSS Osteobl bone
23 chr6:80340400-80341800 Active TSS H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
24 chr6:80340400-80341800 Active TSS H9 Cell Line embryonic stem cell
25 chr6:80340400-80341800 Active TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
26 chr6:80340400-80341800 Active TSS iPS DF 6.9 Cell Line embryonic stem cell
27 chr6:80340400-80341800 Active TSS iPS DF 19.11 Cell Line embryonic stem cell
28 chr6:80340400-80341800 Active TSS Breast Myoepithelial Primary Cells Breast
29 chr6:80340400-80341800 Flanking Active TSS Primary hematopoietic stem cells short term culture blood
30 chr6:80340400-80341800 Active TSS Brain Cingulate Gyrus brain
31 chr6:80340400-80341800 Active TSS Left Ventricle heart
32 chr6:80340400-80341800 Active TSS HSMM muscle
33 chr6:80340400-80341800 Active TSS HSMMtube muscle
34 chr6:80340400-80342000 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
35 chr6:80340400-80342000 Active TSS HUES48 Cell Line embryonic stem cell
36 chr6:80340400-80342600 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
37 chr6:80340400-80342800 Active TSS Colonic Mucosa Colon
38 chr6:80340400-80342800 Active TSS Esophagus oesophagus
39 chr6:80340400-80343000 Active TSS Right Ventricle heart
40 chr6:80340400-80343600 Active TSS Rectal Mucosa Donor 29 rectum
41 chr6:80340600-80341000 Bivalent/Poised TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
42 chr6:80340600-80341000 Flanking Bivalent TSS/Enh IMR90 fetal lung fibroblasts Cell Line lung
43 chr6:80340600-80341000 Flanking Bivalent TSS/Enh Primary T helper naive cells fromperipheralblood blood
44 chr6:80340600-80341000 Flanking Bivalent TSS/Enh Fetal Muscle Leg muscle
45 chr6:80340600-80341000 Flanking Bivalent TSS/Enh Fetal Thymus thymus
46 chr6:80340600-80341000 Flanking Active TSS Psoas Muscle Psoas
47 chr6:80340600-80341000 Flanking Active TSS Right Atrium heart
48 chr6:80340600-80341000 Flanking Active TSS Skeletal Muscle Female skeletal muscle
49 chr6:80340600-80341200 Flanking Bivalent TSS/Enh Primary monocytes fromperipheralblood blood
50 chr6:80340600-80341200 Flanking Bivalent TSS/Enh Primary T cells fromperipheralblood blood

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