The 2.0 version of rSNPBase

Variant report

Variant rs1885809
Chromosome Location chr14:24405051-24405052
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:41 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr14:24399200-24408800 Weak transcription Lung lung
2 chr14:24399400-24408200 Weak transcription Left Ventricle heart
3 chr14:24399400-24410000 Weak transcription Brain Cingulate Gyrus brain
4 chr14:24399400-24411000 Weak transcription Brain Anterior Caudate brain
5 chr14:24399600-24409000 Weak transcription Brain Hippocampus Middle brain
6 chr14:24399600-24409200 Weak transcription Brain Germinal Matrix brain
7 chr14:24400000-24408400 Weak transcription Brain Inferior Temporal Lobe brain
8 chr14:24400000-24420000 Weak transcription Skeletal Muscle Male skeletal muscle
9 chr14:24400400-24411800 Weak transcription HMEC breast
10 chr14:24400600-24405600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
11 chr14:24400600-24405600 Weak transcription Adipose Nuclei Adipose
12 chr14:24400600-24408600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
13 chr14:24400600-24408800 Weak transcription Duodenum Smooth Muscle Duodenum
14 chr14:24400600-24409600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
15 chr14:24400600-24421000 Weak transcription Colon Smooth Muscle Colon
16 chr14:24400800-24408600 Weak transcription Stomach Smooth Muscle stomach
17 chr14:24400800-24409000 Weak transcription Aorta Aorta
18 chr14:24401400-24409800 Weak transcription Primary hematopoietic stem cells short term culture blood
19 chr14:24401800-24409800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
20 chr14:24402200-24410000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
21 chr14:24402200-24421200 Weak transcription Rectal Smooth Muscle rectum
22 chr14:24402400-24409800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
23 chr14:24403000-24408400 Weak transcription Breast Myoepithelial Primary Cells Breast
24 chr14:24403000-24413200 Weak transcription Cortex derived primary cultured neurospheres brain
25 chr14:24403200-24408800 Weak transcription Fetal Lung lung
26 chr14:24403200-24409000 Weak transcription Fetal Muscle Trunk muscle
27 chr14:24403200-24409000 Weak transcription Fetal Stomach stomach
28 chr14:24403200-24409200 Weak transcription Fetal Muscle Leg muscle
29 chr14:24403200-24409800 Weak transcription Ovary ovary
30 chr14:24403400-24405600 Weak transcription Fetal Kidney kidney
31 chr14:24403400-24408800 Enhancers Liver Liver
32 chr14:24404000-24408800 Weak transcription Fetal Adrenal Gland Adrenal Gland
33 chr14:24404200-24406200 Enhancers Stomach Mucosa stomach
34 chr14:24404200-24406400 Enhancers Fetal Intestine Small intestine
35 chr14:24404400-24405800 Enhancers Duodenum Mucosa Duodenum
36 chr14:24404400-24407000 Enhancers Fetal Intestine Large intestine
37 chr14:24404800-24405200 Weak transcription Gastric stomach
38 chr14:24404800-24405200 Weak transcription K562 blood
39 chr14:24404800-24406400 Enhancers Pancreas Pancrea
40 chr14:24404800-24409400 Enhancers HepG2 liver
41 chr14:24405000-24409200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin

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Last update: Aug 31, 2015