The 2.0 version of rSNPBase

Variant report

Variant rs58920623
Chromosome Location chr14:24411883-24411884
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:79 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr14:24400000-24420000 Weak transcription Skeletal Muscle Male skeletal muscle
2 chr14:24400600-24421000 Weak transcription Colon Smooth Muscle Colon
3 chr14:24402200-24421200 Weak transcription Rectal Smooth Muscle rectum
4 chr14:24403000-24413200 Weak transcription Cortex derived primary cultured neurospheres brain
5 chr14:24405600-24422400 Weak transcription Rectal Mucosa Donor 31 rectum
6 chr14:24405800-24421400 Weak transcription Primary T helper cells PMA-I stimulated --
7 chr14:24405800-24422400 Weak transcription Sigmoid Colon Sigmoid Colon
8 chr14:24406600-24413400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
9 chr14:24406600-24416200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
10 chr14:24406800-24414600 Weak transcription Primary T regulatory cells fromperipheralblood blood
11 chr14:24407000-24420000 Weak transcription HSMM muscle
12 chr14:24407000-24421000 Weak transcription Fetal Intestine Large intestine
13 chr14:24407000-24421200 Weak transcription Fetal Kidney kidney
14 chr14:24407200-24413200 Weak transcription Placenta Placenta
15 chr14:24407400-24412400 Weak transcription Pancreatic Islets Pancreatic Islet
16 chr14:24407400-24413800 Weak transcription Fetal Brain Female brain
17 chr14:24407400-24422400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
18 chr14:24407600-24422200 Weak transcription Primary B cells from cord blood blood
19 chr14:24407800-24412000 Weak transcription Primary monocytes fromperipheralblood blood
20 chr14:24407800-24422400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
21 chr14:24408200-24412000 Strong transcription Primary T cells from cord blood blood
22 chr14:24408400-24412000 Strong transcription Breast Myoepithelial Primary Cells Breast
23 chr14:24408400-24421200 Weak transcription Brain Substantia Nigra brain
24 chr14:24408600-24419600 Weak transcription Primary T helper naive cells fromperipheralblood blood
25 chr14:24409600-24413000 Weak transcription Brain Germinal Matrix brain
26 chr14:24409800-24421000 Weak transcription Primary T killer naive cells fromperipheralblood blood
27 chr14:24410200-24412400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
28 chr14:24410200-24420800 Weak transcription Spleen Spleen
29 chr14:24410200-24421000 Weak transcription Left Ventricle heart
30 chr14:24410400-24412400 Enhancers Pancreas Pancrea
31 chr14:24410400-24413800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
32 chr14:24410400-24419600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
33 chr14:24410400-24421000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
34 chr14:24410400-24421000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
35 chr14:24410400-24421000 Weak transcription Brain Hippocampus Middle brain
36 chr14:24410400-24421000 Weak transcription Brain Inferior Temporal Lobe brain
37 chr14:24410400-24421200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
38 chr14:24410600-24412200 Enhancers K562 blood
39 chr14:24410600-24413800 Weak transcription Primary hematopoietic stem cells blood
40 chr14:24410600-24419400 Weak transcription Monocytes-CD14+_RO01746 blood
41 chr14:24410600-24420600 Weak transcription Ovary ovary
42 chr14:24410600-24420800 Weak transcription Brain Cingulate Gyrus brain
43 chr14:24410600-24421000 Weak transcription Primary T helper naive cells from peripheral blood blood
44 chr14:24410600-24421200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
45 chr14:24410600-24421800 Weak transcription Primary B cells from peripheral blood blood
46 chr14:24410800-24412600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
47 chr14:24410800-24412600 Weak transcription Fetal Adrenal Gland Adrenal Gland
48 chr14:24410800-24413600 Weak transcription Fetal Lung lung
49 chr14:24410800-24414000 Weak transcription Thymus Thymus
50 chr14:24410800-24420000 Weak transcription Adipose Nuclei Adipose

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015