Variant report

Variant rs1888535
Chromosome Location chr21:46770532-46770533
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:53 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr21:46767200-46774000 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
2 chr21:46767400-46772000 Enhancers Right Ventricle heart
3 chr21:46767600-46770800 Enhancers Pancreas Pancrea
4 chr21:46767600-46770800 Enhancers Right Atrium heart
5 chr21:46767600-46773000 Enhancers Left Ventricle heart
6 chr21:46767600-46773400 Enhancers Ovary ovary
7 chr21:46767600-46781000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
8 chr21:46767800-46770600 Enhancers NHLF lung
9 chr21:46767800-46775400 Weak transcription HUES6 Cell Line embryonic stem cell
10 chr21:46768000-46771000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
11 chr21:46768000-46773800 Enhancers Fetal Muscle Leg muscle
12 chr21:46768400-46774800 Weak transcription A549 lung
13 chr21:46768600-46771200 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
14 chr21:46768800-46772200 Enhancers Fetal Adrenal Gland Adrenal Gland
15 chr21:46768800-46772400 Enhancers Fetal Stomach stomach
16 chr21:46769000-46772600 Enhancers Spleen Spleen
17 chr21:46769200-46771000 Enhancers Skeletal Muscle Female skeletal muscle
18 chr21:46769200-46771400 Enhancers Esophagus oesophagus
19 chr21:46769200-46771400 Enhancers Placenta Placenta
20 chr21:46769400-46770600 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
21 chr21:46769400-46770600 Enhancers Brain Angular Gyrus brain
22 chr21:46769400-46771600 Weak transcription Psoas Muscle Psoas
23 chr21:46769600-46770600 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
24 chr21:46769600-46770600 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
25 chr21:46769800-46770600 Flanking Active TSS Adipose Nuclei Adipose
26 chr21:46769800-46770800 Enhancers Brain Inferior Temporal Lobe brain
27 chr21:46769800-46770800 Enhancers Fetal Heart heart
28 chr21:46769800-46772000 Enhancers Duodenum Smooth Muscle Duodenum
29 chr21:46769800-46772800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
30 chr21:46770000-46770600 Enhancers Lung lung
31 chr21:46770000-46770600 Enhancers Stomach Mucosa stomach
32 chr21:46770000-46770600 Flanking Active TSS Stomach Smooth Muscle stomach
33 chr21:46770000-46770600 Flanking Active TSS NHDF-Ad bronchial
34 chr21:46770000-46770800 Flanking Bivalent TSS/Enh Skeletal Muscle Male skeletal muscle
35 chr21:46770000-46771000 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
36 chr21:46770000-46771000 Enhancers Duodenum Mucosa Duodenum
37 chr21:46770000-46771800 Enhancers HepG2 liver
38 chr21:46770000-46772800 Enhancers Colonic Mucosa Colon
39 chr21:46770200-46770600 Flanking Bivalent TSS/Enh Fetal Kidney kidney
40 chr21:46770200-46770600 Enhancers Rectal Mucosa Donor 31 rectum
41 chr21:46770200-46770600 Flanking Active TSS Rectal Smooth Muscle rectum
42 chr21:46770200-46770600 Bivalent Enhancer K562 blood
43 chr21:46770200-46770800 Flanking Bivalent TSS/Enh Fetal Brain Male brain
44 chr21:46770200-46770800 Enhancers Gastric stomach
45 chr21:46770200-46771000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
46 chr21:46770200-46784200 Weak transcription Placenta Amnion Placenta Amnion
47 chr21:46770400-46770600 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
48 chr21:46770400-46770600 Enhancers Osteobl bone
49 chr21:46770400-46770800 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
50 chr21:46770400-46770800 Enhancers Colon Smooth Muscle Colon

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