Variant report

Variant rs2838890
Chromosome Location chr21:46770135-46770136
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:61 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr21:46750400-46770200 Weak transcription Gastric stomach
2 chr21:46767200-46770200 Bivalent Enhancer Fetal Muscle Trunk muscle
3 chr21:46767200-46774000 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
4 chr21:46767400-46770200 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
5 chr21:46767400-46772000 Enhancers Right Ventricle heart
6 chr21:46767600-46770800 Enhancers Pancreas Pancrea
7 chr21:46767600-46770800 Enhancers Right Atrium heart
8 chr21:46767600-46773000 Enhancers Left Ventricle heart
9 chr21:46767600-46773400 Enhancers Ovary ovary
10 chr21:46767600-46781000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
11 chr21:46767800-46770600 Enhancers NHLF lung
12 chr21:46767800-46775400 Weak transcription HUES6 Cell Line embryonic stem cell
13 chr21:46768000-46770200 Enhancers Fetal Lung lung
14 chr21:46768000-46770400 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
15 chr21:46768000-46771000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
16 chr21:46768000-46773800 Enhancers Fetal Muscle Leg muscle
17 chr21:46768400-46774800 Weak transcription A549 lung
18 chr21:46768600-46771200 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
19 chr21:46768800-46772200 Enhancers Fetal Adrenal Gland Adrenal Gland
20 chr21:46768800-46772400 Enhancers Fetal Stomach stomach
21 chr21:46769000-46772600 Enhancers Spleen Spleen
22 chr21:46769200-46771000 Enhancers Skeletal Muscle Female skeletal muscle
23 chr21:46769200-46771400 Enhancers Esophagus oesophagus
24 chr21:46769200-46771400 Enhancers Placenta Placenta
25 chr21:46769400-46770200 Enhancers K562 blood
26 chr21:46769400-46770400 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
27 chr21:46769400-46770600 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
28 chr21:46769400-46770600 Enhancers Brain Angular Gyrus brain
29 chr21:46769400-46771600 Weak transcription Psoas Muscle Psoas
30 chr21:46769600-46770200 Bivalent Enhancer Fetal Brain Male brain
31 chr21:46769600-46770200 Enhancers Placenta Amnion Placenta Amnion
32 chr21:46769600-46770400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
33 chr21:46769600-46770400 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
34 chr21:46769600-46770400 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
35 chr21:46769600-46770400 Enhancers Fetal Intestine Small intestine
36 chr21:46769600-46770400 Flanking Active TSS Osteobl bone
37 chr21:46769600-46770600 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
38 chr21:46769600-46770600 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
39 chr21:46769800-46770200 Enhancers NHEK skin
40 chr21:46769800-46770400 Bivalent Enhancer Breast Myoepithelial Primary Cells Breast
41 chr21:46769800-46770400 Flanking Active TSS Colon Smooth Muscle Colon
42 chr21:46769800-46770600 Flanking Active TSS Adipose Nuclei Adipose
43 chr21:46769800-46770800 Enhancers Brain Inferior Temporal Lobe brain
44 chr21:46769800-46770800 Enhancers Fetal Heart heart
45 chr21:46769800-46772000 Enhancers Duodenum Smooth Muscle Duodenum
46 chr21:46769800-46772800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
47 chr21:46770000-46770200 Enhancers ES-UCSF4 Cell Line embryonic stem cell
48 chr21:46770000-46770200 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
49 chr21:46770000-46770200 Bivalent Enhancer Fetal Kidney kidney
50 chr21:46770000-46770200 Enhancers Rectal Smooth Muscle rectum

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