Variant report

Variant	rs188925441
Chromosome Location	chr6:14831805-14831806
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr6:14823162..14824752-chr6:14829920..14831830,2	K562	blood:

Extended variants
information (count: 4 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1023685	chr6:14514647-14838390	Enhancers Weak transcription Active TSS Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
2	nsv1031668	chr6:14774036-15044308	Enhancers Bivalent Enhancer Flanking Active TSS Weak transcription Active TSS Strong transcription ZNF genes & repeats Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS	Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
3	nsv538138	chr6:14774036-15044308	Enhancers Active TSS Weak transcription Flanking Active TSS ZNF genes & repeats Strong transcription Bivalent Enhancer Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh	Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
4	nsv1017572	chr6:14830510-14906933	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Active TSS Bivalent Enhancer Genic enhancers Strong transcription	Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:23 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:14826200-14832000	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
2	chr6:14828600-14837600	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
3	chr6:14830200-14833000	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
4	chr6:14830400-14833200	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
5	chr6:14830600-14832400	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
6	chr6:14830600-14832800	Enhancers	iPS-15b Cell Line	embryonic stem cell
7	chr6:14830600-14832800	Enhancers	iPS-20b Cell Line	embryonic stem cell
8	chr6:14830600-14833000	Enhancers	ES-I3 Cell Line	embryonic stem cell
9	chr6:14831000-14832200	Enhancers	H9 Cell Line	embryonic stem cell
10	chr6:14831400-14833000	Enhancers	HUES64 Cell Line	embryonic stem cell
11	chr6:14831400-14833000	Enhancers	iPS-18 Cell Line	embryonic stem cell
12	chr6:14831600-14832000	Weak transcription	HUES6 Cell Line	embryonic stem cell
13	chr6:14831600-14832200	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
14	chr6:14831600-14832800	Enhancers	HUES48 Cell Line	embryonic stem cell
15	chr6:14831600-14832800	Enhancers	Brain Hippocampus Middle	brain
16	chr6:14831600-14833000	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
17	chr6:14831600-14833000	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
18	chr6:14831600-14833000	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
19	chr6:14831800-14832000	Enhancers	Brain Anterior Caudate	brain
20	chr6:14831800-14832000	Enhancers	Brain Inferior Temporal Lobe	brain
21	chr6:14831800-14832600	Enhancers	Cortex derived primary cultured neurospheres	brain
22	chr6:14831800-14832600	Enhancers	Fetal Kidney	kidney
23	chr6:14831800-14833000	Enhancers	Brain Dorsolateral Prefrontal Cortex	brain

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