Variant report

Variant rs189020220
Chromosome Location chr21:47582387-47582388
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:53 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr21:47573400-47590200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
2 chr21:47573600-47583200 Weak transcription Brain Substantia Nigra brain
3 chr21:47573600-47589600 Weak transcription Primary hematopoietic stem cells blood
4 chr21:47573600-47600200 Weak transcription iPS-18 Cell Line embryonic stem cell
5 chr21:47573600-47602000 Weak transcription Gastric stomach
6 chr21:47573800-47583000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
7 chr21:47573800-47585400 Weak transcription Brain Angular Gyrus brain
8 chr21:47573800-47585600 Weak transcription Muscle Satellite Cultured Cells --
9 chr21:47573800-47588000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
10 chr21:47573800-47590800 Weak transcription Brain Cingulate Gyrus brain
11 chr21:47573800-47591400 Weak transcription Left Ventricle heart
12 chr21:47573800-47592000 Weak transcription Right Ventricle heart
13 chr21:47573800-47593400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
14 chr21:47573800-47593400 Weak transcription Brain Anterior Caudate brain
15 chr21:47573800-47602200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
16 chr21:47573800-47603800 Weak transcription Right Atrium heart
17 chr21:47574000-47590400 Weak transcription Placenta Placenta
18 chr21:47574200-47590800 Weak transcription Brain Inferior Temporal Lobe brain
19 chr21:47575800-47583800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
20 chr21:47577800-47582600 Strong transcription Fetal Intestine Small intestine
21 chr21:47579600-47582400 ZNF genes & repeats iPS DF 19.11 Cell Line embryonic stem cell
22 chr21:47579800-47582400 ZNF genes & repeats H1 Cell Line embryonic stem cell
23 chr21:47580000-47583600 ZNF genes & repeats K562 blood
24 chr21:47580200-47588000 Weak transcription Fetal Muscle Trunk muscle
25 chr21:47580800-47582400 ZNF genes & repeats Thymus Thymus
26 chr21:47580800-47582800 ZNF genes & repeats Fetal Adrenal Gland Adrenal Gland
27 chr21:47581000-47582400 ZNF genes & repeats Foreskin Fibroblast Primary Cells skin01 Skin
28 chr21:47581000-47583000 ZNF genes & repeats Fetal Stomach stomach
29 chr21:47581200-47582400 Bivalent/Poised TSS Fetal Brain Female brain
30 chr21:47581400-47582400 Bivalent Enhancer Placenta Amnion Placenta Amnion
31 chr21:47581400-47585400 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
32 chr21:47581400-47602800 Weak transcription Skeletal Muscle Male skeletal muscle
33 chr21:47581600-47588000 Weak transcription Lung lung
34 chr21:47581600-47588400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
35 chr21:47581600-47588800 Weak transcription Spleen Spleen
36 chr21:47581600-47590000 Weak transcription iPS-20b Cell Line embryonic stem cell
37 chr21:47581600-47600000 Weak transcription HUES64 Cell Line embryonic stem cell
38 chr21:47581600-47600200 Weak transcription HUES48 Cell Line embryonic stem cell
39 chr21:47581800-47588000 Weak transcription Primary hematopoietic stem cells short term culture blood
40 chr21:47582000-47582800 Weak transcription H9 Cell Line embryonic stem cell
41 chr21:47582000-47583000 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
42 chr21:47582000-47583400 Weak transcription Colonic Mucosa Colon
43 chr21:47582000-47585200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
44 chr21:47582000-47588000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
45 chr21:47582000-47588000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
46 chr21:47582000-47592800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
47 chr21:47582000-47602200 Weak transcription iPS-15b Cell Line embryonic stem cell
48 chr21:47582000-47602800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
49 chr21:47582000-47602800 Weak transcription Ovary ovary
50 chr21:47582200-47582400 Strong transcription HUES6 Cell Line embryonic stem cell

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