Variant report

Variant rs1890677
Chromosome Location chr10:729762-729763
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:76 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:716400-732200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
2 chr10:716400-734200 Weak transcription Fetal Kidney kidney
3 chr10:724200-734000 Weak transcription Colonic Mucosa Colon
4 chr10:725400-731400 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
5 chr10:725600-730800 Enhancers Left Ventricle heart
6 chr10:726200-730000 Weak transcription Duodenum Smooth Muscle Duodenum
7 chr10:726200-732200 Weak transcription Esophagus oesophagus
8 chr10:726200-733600 Weak transcription Gastric stomach
9 chr10:727600-730800 Enhancers Right Ventricle heart
10 chr10:727600-733800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
11 chr10:728000-730800 Enhancers Fetal Muscle Leg muscle
12 chr10:728000-732000 Weak transcription Fetal Intestine Large intestine
13 chr10:728000-732200 Weak transcription Fetal Intestine Small intestine
14 chr10:728200-730600 Weak transcription Pancreas Pancrea
15 chr10:728200-730600 Weak transcription Right Atrium heart
16 chr10:728200-732200 Weak transcription Spleen Spleen
17 chr10:728600-733600 Weak transcription HepG2 liver
18 chr10:728800-729800 Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
19 chr10:728800-730000 Flanking Active TSS Brain Germinal Matrix brain
20 chr10:728800-730400 Flanking Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
21 chr10:728800-730400 Flanking Active TSS Brain Cingulate Gyrus brain
22 chr10:728800-730600 Enhancers Cortex derived primary cultured neurospheres brain
23 chr10:728800-731000 Enhancers Fetal Muscle Trunk muscle
24 chr10:729000-729800 Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
25 chr10:729000-729800 Active TSS A549 lung
26 chr10:729000-730000 Flanking Active TSS Foreskin Melanocyte Primary Cells skin03 Skin
27 chr10:729000-730200 Flanking Active TSS Muscle Satellite Cultured Cells --
28 chr10:729000-730200 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
29 chr10:729000-730200 Flanking Active TSS Brain Inferior Temporal Lobe brain
30 chr10:729000-730200 Active TSS Hela-S3 cervix
31 chr10:729000-730400 Flanking Active TSS Brain Angular Gyrus brain
32 chr10:729000-730400 Flanking Active TSS Brain Hippocampus Middle brain
33 chr10:729000-730400 Flanking Active TSS Brain Dorsolateral Prefrontal Cortex brain
34 chr10:729000-730800 Enhancers Fetal Heart heart
35 chr10:729000-730800 Flanking Active TSS Stomach Smooth Muscle stomach
36 chr10:729000-731400 Enhancers Psoas Muscle Psoas
37 chr10:729200-729800 Active TSS H1 Cell Line embryonic stem cell
38 chr10:729200-729800 Active TSS HUES64 Cell Line embryonic stem cell
39 chr10:729200-729800 Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
40 chr10:729200-730000 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
41 chr10:729200-730000 Enhancers iPS-15b Cell Line embryonic stem cell
42 chr10:729200-730200 Active TSS Rectal Mucosa Donor 29 rectum
43 chr10:729200-730200 Flanking Active TSS HSMM muscle
44 chr10:729200-730400 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
45 chr10:729200-730400 Enhancers Fetal Lung lung
46 chr10:729200-730800 Enhancers Fetal Brain Male brain
47 chr10:729200-731400 Enhancers Ovary ovary
48 chr10:729400-729800 Enhancers ES-UCSF4 Cell Line embryonic stem cell
49 chr10:729400-729800 Enhancers Colon Smooth Muscle Colon
50 chr10:729400-729800 Active TSS NH-A brain

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