Variant report

Variant	rs189087
Chromosome Location	chr14:65294339-65294340
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 10 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:9)

rs_ID	r²[population]
rs1006613	1.00[JPT][hapmap];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17826231	1.00[JPT][hapmap];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs229612	1.00[JPT][hapmap];0.85[AMR][1000 genomes];0.81[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs229613	1.00[JPT][hapmap];0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs229614	1.00[JPT][hapmap];0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs229615	1.00[JPT][hapmap];0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs229617	1.00[JPT][hapmap];0.85[AMR][1000 genomes];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72726215	0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8017631	1.00[JPT][hapmap];0.85[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3693408	chr14:65292670-65358576	Enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Flanking Active TSS Weak transcription Active TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Strong transcription	TF binding region CpG island Chromatin interactive region	7 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:19 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:65289800-65295200	Enhancers	Left Ventricle	heart
2	chr14:65290000-65295200	Enhancers	Psoas Muscle	Psoas
3	chr14:65290600-65294400	Weak transcription	Breast Myoepithelial Primary Cells	Breast
4	chr14:65291000-65295600	Enhancers	Fetal Muscle Leg	muscle
5	chr14:65291600-65296000	Enhancers	K562	blood
6	chr14:65292000-65297800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
7	chr14:65292400-65294800	Enhancers	Fetal Muscle Trunk	muscle
8	chr14:65292600-65297800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
9	chr14:65292800-65295000	Enhancers	Primary neutrophils fromperipheralblood	blood
10	chr14:65293000-65294800	Enhancers	Primary monocytes fromperipheralblood	blood
11	chr14:65293000-65294800	Weak transcription	Right Ventricle	heart
12	chr14:65293600-65294600	Enhancers	Pancreatic Islets	Pancreatic Islet
13	chr14:65293600-65295600	Enhancers	HSMMtube	muscle
14	chr14:65293600-65297400	Weak transcription	Fetal Heart	heart
15	chr14:65293800-65294400	Enhancers	Skeletal Muscle Male	skeletal muscle
16	chr14:65293800-65294400	Weak transcription	HMEC	breast
17	chr14:65294000-65294400	Enhancers	Skeletal Muscle Female	skeletal muscle
18	chr14:65294000-65294600	Weak transcription	Right Atrium	heart
19	chr14:65294000-65297800	Weak transcription	Monocytes-CD14+_RO01746	blood

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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