Variant report

Variant	rs1893566
Chromosome Location	chr18:44126909-44126910
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 15 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:15)

rs_ID	r²[population]
rs10775482	0.90[AFR][1000 genomes]
rs11082532	0.93[CEU][hapmap];0.85[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.92[AFR][1000 genomes];0.88[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs12607120	0.90[AFR][1000 genomes];0.88[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs1564130	0.93[AFR][1000 genomes];0.88[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs1868711	0.90[ASN][1000 genomes]
rs2156282	0.92[ASN][1000 genomes]
rs2365336	0.90[AFR][1000 genomes]
rs426303	0.80[ASN][1000 genomes]
rs4890331	0.92[AFR][1000 genomes]
rs4890668	0.92[AFR][1000 genomes];0.87[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs7235681	0.92[AFR][1000 genomes];0.90[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs7239183	0.94[AFR][1000 genomes];0.88[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs8082780	0.92[AFR][1000 genomes]
rs8083018	0.93[AFR][1000 genomes]
rs9945092	0.92[AFR][1000 genomes]

No data

Chromatin state (count:19 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr18:44126600-44127200	Weak transcription	Brain Anterior Caudate	brain
2	chr18:44126600-44127200	Weak transcription	Fetal Muscle Trunk	muscle
3	chr18:44126600-44127800	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
4	chr18:44126600-44128000	Weak transcription	Stomach Smooth Muscle	stomach
5	chr18:44126600-44128200	Weak transcription	Fetal Stomach	stomach
6	chr18:44126600-44128800	Weak transcription	Colon Smooth Muscle	Colon
7	chr18:44126600-44130400	Weak transcription	Right Atrium	heart
8	chr18:44126600-44130600	Weak transcription	Primary neutrophils fromperipheralblood	blood
9	chr18:44126600-44130600	Weak transcription	Monocytes-CD14+_RO01746	blood
10	chr18:44126600-44130800	Weak transcription	Spleen	Spleen
11	chr18:44126600-44131200	Weak transcription	Pancreatic Islets	Pancreatic Islet
12	chr18:44126600-44132200	Weak transcription	Rectal Smooth Muscle	rectum
13	chr18:44126600-44133800	Weak transcription	Brain Hippocampus Middle	brain
14	chr18:44126600-44133800	Weak transcription	Brain Inferior Temporal Lobe	brain
15	chr18:44126600-44134000	Weak transcription	Brain Angular Gyrus	brain
16	chr18:44126600-44135000	Weak transcription	Brain Cingulate Gyrus	brain
17	chr18:44126600-44137200	Weak transcription	Primary monocytes fromperipheralblood	blood
18	chr18:44126600-44139200	Weak transcription	Lung	lung
19	chr18:44126600-44143000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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