Variant report

Variant	rs4890668
Chromosome Location	chr18:44111608-44111609
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 16 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:16)

rs_ID	r²[population]
rs10775482	0.88[AFR][1000 genomes]
rs11082532	1.00[CEU][hapmap];0.91[CHB][hapmap];1.00[JPT][hapmap];0.93[YRI][hapmap];0.95[AFR][1000 genomes];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12607120	0.98[AFR][1000 genomes];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1564130	0.96[AFR][1000 genomes];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs1868711	0.92[ASN][1000 genomes]
rs1893566	0.88[ASW][hapmap];0.93[CEU][hapmap];0.86[CHB][hapmap];0.90[CHD][hapmap];0.92[GIH][hapmap];1.00[JPT][hapmap];0.94[LWK][hapmap];0.85[MKK][hapmap];1.00[TSI][hapmap];0.93[YRI][hapmap];0.92[AFR][1000 genomes];0.87[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs2156282	0.90[ASN][1000 genomes]
rs2365336	0.84[AFR][1000 genomes]
rs426303	0.86[ASN][1000 genomes]
rs4890331	0.86[AFR][1000 genomes]
rs7235681	1.00[AFR][1000 genomes];0.97[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7239183	0.97[AFR][1000 genomes];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs8082780	0.86[AFR][1000 genomes]
rs8083018	0.87[AFR][1000 genomes]
rs9807265	0.80[ASN][1000 genomes]
rs9945092	0.86[AFR][1000 genomes]

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr18:44086000-44114400	Weak transcription	Spleen	Spleen
2	chr18:44093200-44118600	Strong transcription	Primary monocytes fromperipheralblood	blood
3	chr18:44093200-44120400	Strong transcription	Primary neutrophils fromperipheralblood	blood
4	chr18:44094000-44126000	Weak transcription	Adipose Nuclei	Adipose
5	chr18:44104600-44112800	Weak transcription	Lung	lung
6	chr18:44108600-44119400	Strong transcription	Monocytes-CD14+_RO01746	blood
7	chr18:44109200-44126200	Weak transcription	Right Ventricle	heart
8	chr18:44111000-44112000	Enhancers	Brain Dorsolateral Prefrontal Cortex	brain
9	chr18:44111200-44126000	Weak transcription	Brain Angular Gyrus	brain
10	chr18:44111400-44112200	Weak transcription	Brain Anterior Caudate	brain

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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