Variant report

Variant	rs9807265
Chromosome Location	chr18:44093676-44093677
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 8 )
Associated
traits (count: 1 )

rSNPs within LD-proxies of this variant (count:8)

rs_ID	r²[population]
rs11082532	0.89[JPT][hapmap];0.81[ASN][1000 genomes]
rs12607120	0.82[ASN][1000 genomes]
rs1551233	0.89[AFR][1000 genomes];0.81[EUR][1000 genomes]
rs1893566	0.89[JPT][hapmap]
rs426303	0.87[AFR][1000 genomes];0.99[AMR][1000 genomes];0.88[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs4890668	0.80[ASN][1000 genomes]
rs7235681	0.81[ASN][1000 genomes]
rs7239183	0.81[ASN][1000 genomes]

mRNA abundance (count:1)

SNP	Gene	Cis/trans	Tissue	Source
rs9807265	HAUS1	cis	cerebellum	SCAN

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr18:44086000-44114400	Weak transcription	Spleen	Spleen
2	chr18:44086800-44099200	Weak transcription	Right Ventricle	heart
3	chr18:44088000-44096400	Strong transcription	Monocytes-CD14+_RO01746	blood
4	chr18:44093200-44118600	Strong transcription	Primary monocytes fromperipheralblood	blood
5	chr18:44093200-44120400	Strong transcription	Primary neutrophils fromperipheralblood	blood
6	chr18:44093400-44094000	ZNF genes & repeats	Adipose Nuclei	Adipose

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links