Variant report

Variant rs1893980
Chromosome Location chr18:13372192-13372193
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:71 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr18:13351800-13374800 Weak transcription Skeletal Muscle Female skeletal muscle
2 chr18:13355000-13374200 Weak transcription Dnd41 blood
3 chr18:13356400-13379200 Weak transcription Aorta Aorta
4 chr18:13359400-13379400 Weak transcription Psoas Muscle Psoas
5 chr18:13362000-13374600 Weak transcription Fetal Muscle Leg muscle
6 chr18:13365200-13372200 Weak transcription Brain Angular Gyrus brain
7 chr18:13365800-13376400 Weak transcription Liver Liver
8 chr18:13366800-13374200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
9 chr18:13367200-13372200 Weak transcription Brain Cingulate Gyrus brain
10 chr18:13367200-13372200 Weak transcription Brain Substantia Nigra brain
11 chr18:13367200-13374600 Weak transcription Brain Hippocampus Middle brain
12 chr18:13367800-13372600 Weak transcription Lung lung
13 chr18:13367800-13374800 Weak transcription Right Atrium heart
14 chr18:13368800-13372200 Weak transcription Brain Anterior Caudate brain
15 chr18:13369000-13373600 Enhancers Primary T helper cells fromperipheralblood blood
16 chr18:13369200-13373000 Enhancers Primary T cells fromperipheralblood blood
17 chr18:13369200-13374600 Enhancers Primary T regulatory cells fromperipheralblood blood
18 chr18:13369600-13374600 Weak transcription Gastric stomach
19 chr18:13370000-13374600 Weak transcription Esophagus oesophagus
20 chr18:13370000-13375000 Weak transcription Fetal Heart heart
21 chr18:13370000-13382200 Enhancers Fetal Brain Male brain
22 chr18:13370400-13372200 Weak transcription Fetal Intestine Small intestine
23 chr18:13370400-13372800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
24 chr18:13370400-13374600 Weak transcription Stomach Smooth Muscle stomach
25 chr18:13370400-13374800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
26 chr18:13370400-13374800 Weak transcription Rectal Smooth Muscle rectum
27 chr18:13370400-13374800 Weak transcription A549 lung
28 chr18:13370400-13375000 Weak transcription Fetal Stomach stomach
29 chr18:13370600-13372200 Weak transcription Duodenum Mucosa Duodenum
30 chr18:13370600-13372200 Weak transcription HSMMtube muscle
31 chr18:13370600-13374200 Weak transcription Right Ventricle heart
32 chr18:13370600-13374600 Weak transcription Breast Myoepithelial Primary Cells Breast
33 chr18:13370600-13374600 Weak transcription Colon Smooth Muscle Colon
34 chr18:13370600-13374600 Weak transcription NH-A brain
35 chr18:13370600-13375000 Weak transcription Stomach Mucosa stomach
36 chr18:13370800-13372200 Weak transcription Small Intestine intestine
37 chr18:13371000-13372600 Enhancers Brain Germinal Matrix brain
38 chr18:13371000-13373000 Enhancers Primary B cells from peripheral blood blood
39 chr18:13371200-13372200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
40 chr18:13371200-13372800 Enhancers Primary mononuclear cells fromperipheralblood Blood
41 chr18:13371200-13372800 Enhancers Spleen Spleen
42 chr18:13371200-13373000 Enhancers Primary B cells from cord blood blood
43 chr18:13371200-13373400 Enhancers Primary T helper memory cells from peripheral blood 1 blood
44 chr18:13371200-13375200 Enhancers Primary T helper cells PMA-I stimulated --
45 chr18:13371200-13376200 Enhancers Primary T helper naive cells fromperipheralblood blood
46 chr18:13371400-13372200 Genic enhancers Fetal Thymus thymus
47 chr18:13371400-13372200 Weak transcription Left Ventricle heart
48 chr18:13371400-13372200 Weak transcription Rectal Mucosa Donor 29 rectum
49 chr18:13371400-13372400 Enhancers Primary monocytes fromperipheralblood blood
50 chr18:13371400-13372400 Enhancers Monocytes-CD14+_RO01746 blood

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