Variant report

Variant	rs1902710
Chromosome Location	chr10:98035422-98035423
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr10:98031417..98034385-chr10:98034757..98037553,2	MCF-7	breast:

rs_ID	r²[population]
rs12248659	1.00[EUR][1000 genomes]
rs56951868	1.00[EUR][1000 genomes]
rs58051530	1.00[EUR][1000 genomes]
rs58536989	1.00[EUR][1000 genomes]
rs7069653	1.00[ASW][hapmap]
rs74153603	1.00[AMR][1000 genomes]
rs74153607	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs74153608	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs74153609	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs74153613	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]

Chromatin state (count:35 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:98031400-98035600	Weak transcription	Colon Smooth Muscle	Colon
2	chr10:98031400-98035600	Weak transcription	Stomach Smooth Muscle	stomach
3	chr10:98031600-98035600	Weak transcription	Dnd41	blood
4	chr10:98032400-98047200	Weak transcription	Duodenum Smooth Muscle	Duodenum
5	chr10:98032800-98035600	Weak transcription	Esophagus	oesophagus
6	chr10:98032800-98035600	Weak transcription	Fetal Kidney	kidney
7	chr10:98032800-98035600	Weak transcription	Gastric	stomach
8	chr10:98032800-98035600	Weak transcription	Skeletal Muscle Female	skeletal muscle
9	chr10:98033000-98035800	Weak transcription	Spleen	Spleen
10	chr10:98033000-98036200	Weak transcription	Colonic Mucosa	Colon
11	chr10:98033200-98035600	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
12	chr10:98033200-98035600	Weak transcription	Fetal Lung	lung
13	chr10:98033200-98035600	Weak transcription	Stomach Mucosa	stomach
14	chr10:98033400-98035800	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
15	chr10:98033400-98037800	Enhancers	Primary B cells from peripheral blood	blood
16	chr10:98033600-98035600	Weak transcription	Fetal Intestine Small	intestine
17	chr10:98033600-98037400	Enhancers	Primary B cells from cord blood	blood
18	chr10:98034200-98035600	Weak transcription	Fetal Intestine Large	intestine
19	chr10:98034200-98042200	Weak transcription	Placenta Amnion	Placenta Amnion
20	chr10:98034400-98036400	Enhancers	GM12878-XiMat	blood
21	chr10:98034600-98036400	Enhancers	Rectal Mucosa Donor 29	rectum
22	chr10:98035200-98036400	Enhancers	Liver	Liver
23	chr10:98035200-98036400	Enhancers	Left Ventricle	heart
24	chr10:98035200-98036400	Enhancers	Right Ventricle	heart
25	chr10:98035200-98036600	Enhancers	Pancreas	Pancrea
26	chr10:98035200-98037400	Enhancers	Breast Myoepithelial Primary Cells	Breast
27	chr10:98035200-98037400	Enhancers	HMEC	breast
28	chr10:98035200-98037600	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
29	chr10:98035400-98035800	Enhancers	Small Intestine	intestine
30	chr10:98035400-98036200	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
31	chr10:98035400-98036200	Enhancers	Adipose Nuclei	Adipose
32	chr10:98035400-98036600	Enhancers	Duodenum Mucosa	Duodenum
33	chr10:98035400-98036600	Enhancers	Rectal Mucosa Donor 31	rectum
34	chr10:98035400-98037000	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
35	chr10:98035400-98037200	Enhancers	NHEK	skin

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