Variant report

Variant rs190678339
Chromosome Location chr11:64003503-64003504
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:123 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:63999400-64007200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
2 chr11:64001000-64003600 Active TSS Pancreatic Islets Pancreatic Islet
3 chr11:64001600-64003600 Active TSS HUES6 Cell Line embryonic stem cell
4 chr11:64002400-64003800 Flanking Active TSS Stomach Smooth Muscle stomach
5 chr11:64002600-64003600 Flanking Active TSS Adipose Nuclei Adipose
6 chr11:64002600-64003600 Flanking Active TSS Colonic Mucosa Colon
7 chr11:64002600-64003600 Flanking Active TSS Colon Smooth Muscle Colon
8 chr11:64002600-64003600 Flanking Active TSS GM12878-XiMat blood
9 chr11:64002600-64003800 Transcr. at gene 5' and 3' Foreskin Fibroblast Primary Cells skin02 Skin
10 chr11:64002600-64003800 Flanking Active TSS Right Ventricle heart
11 chr11:64002800-64003600 Enhancers Spleen Spleen
12 chr11:64002800-64003600 Flanking Active TSS NHDF-Ad bronchial
13 chr11:64002800-64003800 Transcr. at gene 5' and 3' Foreskin Keratinocyte Primary Cells skin02 Skin
14 chr11:64002800-64005400 Weak transcription Small Intestine intestine
15 chr11:64003000-64003600 Enhancers Primary T helper memory cells from peripheral blood 1 blood
16 chr11:64003000-64003600 Enhancers Primary T helper cells fromperipheralblood blood
17 chr11:64003000-64003600 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
18 chr11:64003000-64003600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
19 chr11:64003000-64003600 Transcr. at gene 5' and 3' Foreskin Keratinocyte Primary Cells skin03 Skin
20 chr11:64003000-64003600 Transcr. at gene 5' and 3' Foreskin Melanocyte Primary Cells skin03 Skin
21 chr11:64003000-64003600 Transcr. at gene 5' and 3' Brain Germinal Matrix brain
22 chr11:64003000-64003600 Enhancers Esophagus oesophagus
23 chr11:64003000-64003600 Genic enhancers Fetal Adrenal Gland Adrenal Gland
24 chr11:64003000-64003600 Active TSS Fetal Brain Female brain
25 chr11:64003000-64003600 Enhancers Fetal Thymus thymus
26 chr11:64003000-64003600 Enhancers Ovary ovary
27 chr11:64003000-64003600 Enhancers Psoas Muscle Psoas
28 chr11:64003000-64003600 Transcr. at gene 5' and 3' Dnd41 blood
29 chr11:64003000-64003600 Flanking Active TSS HepG2 liver
30 chr11:64003000-64003600 Enhancers Osteobl bone
31 chr11:64003000-64003800 Genic enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
32 chr11:64003000-64003800 Enhancers Primary Natural Killer cells fromperipheralblood blood
33 chr11:64003000-64003800 Enhancers Primary T killer naive cells fromperipheralblood blood
34 chr11:64003000-64003800 Transcr. at gene 5' and 3' Foreskin Fibroblast Primary Cells skin01 Skin
35 chr11:64003000-64003800 Genic enhancers Lung lung
36 chr11:64003000-64003800 Transcr. at gene 5' and 3' Skeletal Muscle Male skeletal muscle
37 chr11:64003000-64004000 Enhancers Primary T cells fromperipheralblood blood
38 chr11:64003000-64004000 Enhancers Stomach Mucosa stomach
39 chr11:64003000-64004800 Weak transcription H9 Cell Line embryonic stem cell
40 chr11:64003000-64004800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
41 chr11:64003000-64004800 Weak transcription Aorta Aorta
42 chr11:64003000-64007600 Weak transcription ES-I3 Cell Line embryonic stem cell
43 chr11:64003000-64007600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
44 chr11:64003000-64007800 Genic enhancers Fetal Muscle Trunk muscle
45 chr11:64003200-64003600 Transcr. at gene 5' and 3' H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
46 chr11:64003200-64003600 Transcr. at gene 5' and 3' iPS DF 19.11 Cell Line embryonic stem cell
47 chr11:64003200-64003600 Transcr. at gene 5' and 3' Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
48 chr11:64003200-64003600 Enhancers Primary T cells from cord blood blood
49 chr11:64003200-64003600 Enhancers Primary T helper memory cells from peripheral blood 2 blood
50 chr11:64003200-64003600 Enhancers Primary T helper naive cells from peripheral blood blood

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