Variant report

Variant	nsv897680
Chromosome Location	chr11:63997338-64022459
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:3577)
CpG islands
(count:3976)
Chromatin interactive
region (count:137)
LncRNA
region (count:15)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:3577 , 50 per page) page: 1 2 3 4 5 6 7 ... 72

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr11:64017714-64017848	K562	blood:	n/a	n/a
2	ARID3A	chr11:64009168-64009170	HepG2	liver:	n/a	n/a
3	ARID3A	chr11:64015633-64015635	K562	blood:	n/a	n/a
4	ARID3A	chr11:64013328-64013472	K562	blood:	n/a	n/a
5	ATF1	chr11:64008241-64008627	K562	blood:	n/a	n/a
6	ATF1	chr11:63997533-63998157	K562	blood:	n/a	n/a
7	ATF2	chr11:64007264-64008587	GM12878	blood:	n/a	n/a
8	ATF2	chr11:64008125-64008735	H1-hESC	embryonic stem cell:	n/a	n/a
9	ATF2	chr11:64011277-64011612	H1-hESC	embryonic stem cell:	n/a	n/a
10	ATF2	chr11:63997593-63998027	GM12878	blood:	n/a	n/a
11	ATF2	chr11:64014366-64014903	H1-hESC	embryonic stem cell:	n/a	n/a
12	ATF2	chr11:64008037-64008474	H1-hESC	embryonic stem cell:	n/a	n/a
13	ATF2	chr11:63997813-63998048	GM12878	blood:	n/a	n/a
14	ATF2	chr11:64013121-64013695	H1-hESC	embryonic stem cell:	n/a	n/a
15	ATF2	chr11:64007292-64008913	GM12878	blood:	n/a	n/a
16	ATF3	chr11:63999714-63999929	K562	blood:	n/a	n/a
17	ATF3	chr11:64013093-64013611	A549	lung:	n/a	n/a
18	ATF3	chr11:64013274-64013500	K562	blood:	n/a	n/a
19	ATF3	chr11:64013134-64013699	A549	lung:	n/a	n/a
20	ATF3	chr11:64018787-64019143	K562	blood:	n/a	chr11:64018927-64018936
21	ATF3	chr11:64013123-64013563	K562	blood:	n/a	n/a
22	BACH1	chr11:64008124-64009195	H1-hESC	embryonic stem cell:	n/a	n/a
23	BACH1	chr11:64007975-64008382	K562	blood:	n/a	n/a
24	BACH1	chr11:64017592-64017762	K562	blood:	n/a	n/a
25	BACH1	chr11:63997757-63998177	H1-hESC	embryonic stem cell:	n/a	n/a
26	BACH1	chr11:64009803-64009864	K562	blood:	n/a	n/a
27	BACH1	chr11:64013411-64013540	H1-hESC	embryonic stem cell:	n/a	n/a
28	BACH1	chr11:64009738-64010048	H1-hESC	embryonic stem cell:	n/a	n/a
29	BATF	chr11:64013267-64013506	GM12878	blood:	n/a	n/a
30	BATF	chr11:64007385-64007785	GM12878	blood:	n/a	n/a
31	BCL11A	chr11:64007386-64008102	GM12878	blood:	n/a	n/a
32	BCL11A	chr11:64007498-64007847	GM12878	blood:	n/a	n/a
33	BCL3	chr11:64011504-64011786	K562	blood:	n/a	n/a
34	BCL3	chr11:64007508-64010363	A549	lung:	n/a	chr11:64008413-64008422 chr11:64008867-64008880 chr11:64009302-64009311 chr11:64008425-64008438 chr11:64008875-64008884 chr11:64009641-64009654 chr11:64008863-64008876 chr11:64008351-64008360 chr11:64008974-64008983 chr11:64008868-64008877 chr11:64009165-64009174 chr11:64009330-64009343
35	BCL3	chr11:64016489-64017122	A549	lung:	n/a	n/a
36	BCL3	chr11:64017313-64017892	A549	lung:	n/a	n/a
37	BCL3	chr11:64010566-64011505	A549	lung:	n/a	n/a
38	BCL3	chr11:64011507-64011991	A549	lung:	n/a	chr11:64011791-64011799
39	BCL3	chr11:64012561-64013718	A549	lung:	n/a	chr11:64013569-64013582 chr11:64013147-64013155 chr11:64013495-64013508
40	BCL3	chr11:63997653-63998266	GM12878	blood:	n/a	n/a
41	BCL3	chr11:64018442-64018876	A549	lung:	n/a	chr11:64018826-64018839
42	BCL3	chr11:64007492-64008784	GM12878	blood:	n/a	chr11:64008413-64008422 chr11:64008425-64008438 chr11:64008351-64008360
43	BCL3	chr11:64007865-64012097	A549	lung:	n/a	chr11:64008413-64008422 chr11:64008867-64008880 chr11:64009302-64009311 chr11:64008425-64008438 chr11:64008875-64008884 chr11:64009641-64009654 chr11:64011791-64011799 chr11:64008863-64008876 chr11:64008351-64008360 chr11:64008974-64008983 chr11:64008868-64008877 chr11:64009165-64009174 chr11:64009330-64009343
44	BCL3	chr11:64017140-64017731	A549	lung:	n/a	n/a
45	BCL3	chr11:64014369-64015117	A549	lung:	n/a	chr11:64015040-64015049 chr11:64015031-64015044 chr11:64014422-64014431 chr11:64014369-64014382 chr11:64014861-64014869
46	BCL3	chr11:64012312-64013922	A549	lung:	n/a	chr11:64013569-64013582 chr11:64013147-64013155 chr11:64013495-64013508
47	BCL3	chr11:64001575-64001910	A549	lung:	n/a	chr11:64001891-64001904 chr11:64001884-64001897 chr11:64001889-64001898
48	BCL3	chr11:63997495-63998663	A549	lung:	n/a	n/a
49	BCLAF1	chr11:64014504-64015253	K562	blood:	n/a	chr11:64015040-64015049 chr11:64015031-64015044 chr11:64014861-64014869
50	BCLAF1	chr11:64007488-64008776	GM12878	blood:	n/a	chr11:64008413-64008422 chr11:64008425-64008438 chr11:64008351-64008360

(count:3976 , 50 per page) page: 1 2 3 4 5 6 7 ... 80

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr11:64007569-64007619	Caco-2	colon:	n/a
2	chr11:63997715-63997765	AG09319	gingival:	n/a
3	chr11:63997715-63997765	NHBE	bronchial:	n/a
4	chr11:64009913-64009963	HEEpiC	esophagus:	n/a
5	chr11:63997982-63998032	NH-A	brain:	n/a
6	chr11:63997492-63997542	ECC-1	luminal epithelium:	n/a
7	chr11:64009913-64009963	AG09309	skin:	n/a
8	chr11:64009083-64009133	HIPEpiC	eye:	n/a
9	chr11:64002295-64002345	MCF10A-Er-Src	breast:	n/a
10	chr11:64018643-64018693	IMR90	lung:	fetal
11	chr11:64018643-64018693	HUVEC	blood vessel:	n/a
12	chr11:64007569-64007619	Caco-2	colon:	n/a
13	chr11:63997715-63997765	AG09319	gingival:	n/a
14	chr11:63997715-63997765	NHBE	bronchial:	n/a
15	chr11:64009913-64009963	HEEpiC	esophagus:	n/a
16	chr11:63997982-63998032	NH-A	brain:	n/a
17	chr11:63997492-63997542	ECC-1	luminal epithelium:	n/a
18	chr11:64009913-64009963	AG09309	skin:	n/a
19	chr11:64009083-64009133	HIPEpiC	eye:	n/a
20	chr11:64002295-64002345	MCF10A-Er-Src	breast:	n/a
21	chr11:64018643-64018693	IMR90	lung:	fetal
22	chr11:64018643-64018693	HUVEC	blood vessel:	n/a
23	chr11:64001994-64002044	A549	lung:	n/a
24	chr11:64014554-64014604	IMR90	lung:	fetal
25	chr11:64007813-64007863	NB4	blood:	n/a
26	chr11:64008424-64008474	PFSK-1	brain:	n/a
27	chr11:64009400-64009450	T-47D	breast:	n/a
28	chr11:63997586-63997636	HCM	heart:	n/a
29	chr11:64008466-64008516	Hela-S3	cervix:	n/a
30	chr11:64018549-64018599	H1-hESC	embryonic stem cell:	embryo
31	chr11:64009878-64009928	AoSMC	blood vessel:	n/a
32	chr11:64009878-64009928	PANC-1	pancreas:	n/a
33	chr11:63997306-63997356	Caco-2	colon:	n/a
34	chr11:64007813-64007863	SK-N-MC	brain:	n/a
35	chr11:64009913-64009963	Caco-2	colon:	n/a
36	chr11:63997961-63998011	HMEC	breast:	n/a
37	chr11:63997982-63998032	BE2_C	brain:	n/a
38	chr11:64017619-64017669	Caco-2	colon:	n/a
39	chr11:64008466-64008516	HEEpiC	esophagus:	n/a
40	chr11:64002298-64002348	GM06990	blood:	n/a
41	chr11:64013991-64014041	NT2-D1	testis:	n/a
42	chr11:64009083-64009133	HRCEpiC	kidney:	n/a
43	chr11:64015289-64015339	RPTEC	kidney:	n/a
44	chr11:64001712-64001762	SK-N-MC	brain:	n/a
45	chr11:64019217-64019267	H1-hESC	embryonic stem cell:	embryo
46	chr11:63997668-63997718	SAEC	small airway:	n/a
47	chr11:63997492-63997542	SK-N-SH_RA	brain:	n/a
48	chr11:63998032-63998082	AG10803	skin:	n/a
49	chr11:64013837-64013887	ECC-1	luminal epithelium:	n/a
50	chr11:64009699-64009749	IMR90	lung:	fetal

(count:137 , 50 per page) page: 1 2 3

No.	Distal block	Cell Line	Cell type
1	chr11:64011433..64012934-chr9:86594383..86596466,2	MCF-7	breast:
2	chr11:64013769..64016116-chr11:64064254..64066876,2	MCF-7	breast:
3	chr11:64018454..64020454-chr11:65189395..65191669,2	MCF-7	breast:
4	chr11:63930142..63931799-chr11:64009649..64012037,2	K562	blood:
5	chr11:64007412..64008124-chr3:48514042..48514851,2	Hela-S3	cervix:
6	chr11:64014325..64014848-chr19:59070528..59071297,2	NB4	blood:
7	chr1:6844674..6845192-chr11:64007926..64008926,2	Hela-S3	cervix:
8	chr11:64006071..64007767-chr11:64081275..64082893,2	MCF-7	breast:
9	chr11:63998837..64000808-chr11:64079142..64081596,2	MCF-7	breast:
10	chr11:64005251..64012775-chr11:64065543..64076594,19	MCF-7	breast:
11	chr11:64007751..64008560-chr7:26240100..26240712,2	Hela-S3	cervix:
12	chr1:153606923..153607571-chr11:64019351..64020057,2	Hela-S3	cervix:
13	chr11:63951070..63956024-chr11:64006485..64011246,10	MCF-7	breast:
14	chr11:64014885..64017161-chr11:64083467..64086762,3	K562	blood:
15	chr11:63931932..63936018-chr11:63996543..64001155,4	MCF-7	breast:
16	chr11:64001215..64003769-chr11:64062719..64064324,2	MCF-7	breast:
17	chr11:64003628..64022712-chr11:64064086..64078429,56	MCF-7	breast:
18	chr11:64008764..64009517-chr11:64018501..64019367,2	K562	blood:
19	chr11:64001901..64002697-chr15:65596667..65597412,2	HCT-116	colon:
20	chr11:64001193..64003368-chr11:64108712..64111498,2	MCF-7	breast:
21	chr11:64013049..64014994-chr11:64052537..64054255,3	MCF-7	breast:
22	chr11:63997112..63999658-chr11:64063804..64066136,2	MCF-7	breast:
23	chr11:64001124..64003237-chr5:180669340..180672210,2	MCF-7	breast:
24	chr11:64007608..64008385-chr16:28834777..28835600,2	Hela-S3	cervix:
25	chr11:64018959..64019872-chr19:2050968..2051549,2	Hela-S3	cervix:
26	chr11:64008635..64009566-chr11:68038885..68039558,2	Hela-S3	cervix:
27	chr11:64008521..64009117-chr12:13044506..13045181,2	Hela-S3	cervix:
28	chr11:62607062..62609117-chr11:64013119..64014953,2	MCF-7	breast:
29	chr11:64008764..64009517-chr11:64018501..64019367,2	K562	blood:
30	chr11:63932116..63935124-chr11:64007812..64010252,3	MCF-7	breast:
31	chr11:64012978..64013548-chr19:39926002..39926585,2	Hela-S3	cervix:
32	chr11:64001770..64003427-chr11:64071826..64073538,2	MCF-7	breast:
33	chr11:64017311..64024506-chr11:64050135..64055747,10	MCF-7	breast:
34	chr11:64012924..64015359-chr11:64050536..64054535,6	MCF-7	breast:
35	chr11:63932405..63934131-chr11:64004230..64006451,2	MCF-7	breast:
36	chr11:64020572..64023323-chr11:64085691..64088535,2	K562	blood:
37	chr11:64013671..64014437-chrX:47092332..47093146,2	Hela-S3	cervix:
38	chr11:63962304..63965510-chr11:64012798..64015195,3	MCF-7	breast:
39	chr11:63784023..63786647-chr11:64006820..64008419,2	K562	blood:
40	chr11:64013373..64015770-chr11:64059905..64062431,2	MCF-7	breast:
41	chr11:64008114..64008755-chr11:128391696..128392371,2	Hela-S3	cervix:
42	chr11:64008240..64009007-chr6:13328229..13328888,2	Hela-S3	cervix:
43	chr11:64012920..64014834-chr17:54968329..54970844,2	MCF-7	breast:
44	chr11:64013225..64015116-chr11:64056938..64059333,2	MCF-7	breast:
45	chr11:64017360..64020043-chr11:64060077..64062122,2	MCF-7	breast:
46	chr11:64004012..64005762-chr11:64124323..64126720,2	MCF-7	breast:
47	chr11:64010701..64012407-chr11:64113744..64115719,2	K562	blood:
48	chr11:63997990..64000103-chr11:64070945..64073334,3	MCF-7	breast:
49	chr11:64008248..64009126-chr3:48481295..48481875,2	NB4	blood:
50	chr11:64008607..64011562-chr11:64108610..64113296,4	MCF-7	breast:

(count:15 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-FKBP2-1	chr11:64015425-64015689	ENSG00000256940.1
2	lnc-DNAJC4-1	chr11:64001545-64001758	NONHSAT021966
3	lnc-DNAJC4-3	chr11:64004599-64004694	NONHSAT021969
4	lnc-FKBP2-1	chr11:64013436-64013561	ENSG00000256940.1
5	lnc-FKBP2-1	chr11:64014526-64014731	ENSG00000256940.1
6	lnc-PPP1R14B-1	chr11:64015873-64016070	ENSG00000257086.1
7	lnc-TRPT1-1	chr11:64001666-64001824	ENSG00000256116.1
8	lnc-PPP1R14B-1	chr11:64016856-64016966	ENSG00000257086.1
9	lnc-TRPT1-1	chr11:63998695-63998762	ENSG00000256116.1
10	lnc-DNAJC4-3	chr11:64005828-64006259	NONHSAT021969
11	lnc-PPP1R14B-1	chr11:64015522-64015644	ENSG00000257086.1
12	lnc-FKBP2-1	chr11:64015425-64015649	ENSG00000256940.1
13	lnc-PPP1R14B-1	chr11:64014411-64014831	ENSG00000257086.1
14	lnc-DNAJC4-1	chr11:64000964-64001452	NONHSAT021966
15	lnc-DNAJC4-3	chr11:64004993-64005127	NONHSAT021969

No data

Variant related genes	Relation type
FKBP2	TF binding region
PPP1R14B	TF binding region
PLCB3	TF binding region
DNAJC4	TF binding region
ENSG00000256116	TF binding region
TRPT1	TF binding region
ENSG00000256940	TF binding region
VEGFB	TF binding region
ENSG00000257086	TF binding region
FKBP2	CpG island
PPP1R14B	CpG island
PLCB3	CpG island
DNAJC4	CpG island
ENSG00000256116	CpG island
TRPT1	CpG island
ENSG00000256940	CpG island
VEGFB	CpG island
ENSG00000257086	CpG island
ENSG00000145979	chromatin interactions
ENSG00000245532	chromatin interactions
ENSG00000254501	chromatin interactions
ENSG00000177410	chromatin interactions
ENSG00000124201	chromatin interactions
ENSG00000168066	chromatin interactions
ENSG00000133316	chromatin interactions
ENSG00000173153	chromatin interactions
ENSG00000236269	chromatin interactions
ENSG00000134954	chromatin interactions
ENSG00000149782	chromatin interactions
ENSG00000173113	chromatin interactions
ENSG00000089280	chromatin interactions
ENSG00000265238	chromatin interactions
ENSG00000168488	chromatin interactions
ENSG00000121060	chromatin interactions
ENSG00000257069	chromatin interactions
ENSG00000257529	chromatin interactions
ENSG00000269038	chromatin interactions
ENSG00000013588	chromatin interactions
ENSG00000174579	chromatin interactions
ENSG00000236935	chromatin interactions
ENSG00000127564	chromatin interactions
ENSG00000074800	chromatin interactions
ENSG00000138166	chromatin interactions
ENSG00000122566	chromatin interactions
ENSG00000126432	chromatin interactions
ENSG00000265148	chromatin interactions
ENSG00000092841	chromatin interactions
ENSG00000005379	chromatin interactions
ENSG00000136877	chromatin interactions
ENSG00000264549	chromatin interactions
ENSG00000167770	chromatin interactions
ENSG00000171067	chromatin interactions
ENSG00000215769	chromatin interactions
ENSG00000209042	chromatin interactions
ENSG00000099875	chromatin interactions
ENSG00000102103	chromatin interactions
ENSG00000133315	chromatin interactions
ENSG00000168439	chromatin interactions
ENSG00000164051	chromatin interactions
ENSG00000223247	chromatin interactions
ENSG00000106399	chromatin interactions
ENSG00000182450	chromatin interactions
ENSG00000164054	chromatin interactions
ENSG00000241343	chromatin interactions
ENSG00000180596	chromatin interactions
ENSG00000215417	chromatin interactions
ENSG00000207024	chromatin interactions
ENSG00000105193	chromatin interactions
ENSG00000173486	chromatin interactions
ENSG00000178966	chromatin interactions
ENSG00000162073	chromatin interactions
ENSG00000040275	chromatin interactions
ENSG00000173264	chromatin interactions
ENSG00000157637	chromatin interactions
ENSG00000267858	chromatin interactions
ENSG00000180573	chromatin interactions
ENSG00000168071	chromatin interactions
ENSG00000126768	chromatin interactions
ENSG00000149809	chromatin interactions
ENSG00000185475	chromatin interactions
ENSG00000232112	chromatin interactions
ENSG00000237436	chromatin interactions
ENSG00000200156	chromatin interactions
ENSG00000103066	chromatin interactions
ENSG00000102226	chromatin interactions
ENSG00000219435	chromatin interactions
ENSG00000264920	chromatin interactions
ENSG00000149480	chromatin interactions
ENSG00000204628	chromatin interactions
ENSG00000165119	chromatin interactions
ENSG00000002330	chromatin interactions
ENSG00000173812	chromatin interactions
ENSG00000162302	chromatin interactions

Extended variants
information (count: 1158 )
Associated
traits (count: 95 )

Variant overlapped rSNPs/rCNVs (count:1158 , 50 per page) page: 1 2 3 4 5 6 7 ... 24

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs633557	chr11:63997338-63997339	Enhancers Weak transcription Flanking Active TSS Active TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	11 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
2	rs142287515	chr11:63997351-63997352	Enhancers Weak transcription Flanking Active TSS Active TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
3	rs569154482	chr11:63997355-63997356	Enhancers Weak transcription Flanking Active TSS Active TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
4	rs267603095	chr11:63997370-63997371	Enhancers Weak transcription Flanking Active TSS Active TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
5	rs531474760	chr11:63997376-63997377	Enhancers Weak transcription Flanking Active TSS Active TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
6	rs146389063	chr11:63997415-63997416	Active TSS Weak transcription Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
7	rs199572285	chr11:63997452-63997453	Active TSS Weak transcription Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
8	rs570468118	chr11:63997455-63997456	Active TSS Weak transcription Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
9	rs372758130	chr11:63997507-63997508	Active TSS Weak transcription Flanking Active TSS Enhancers	TF binding region CpG island Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
10	rs374705660	chr11:63997513-63997514	Active TSS Weak transcription Flanking Active TSS Enhancers	TF binding region CpG island Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
11	rs118176767	chr11:63997524-63997525	Active TSS Weak transcription Flanking Active TSS Enhancers	TF binding region CpG island Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
12	rs61886863	chr11:63997564-63997565	Active TSS Weak transcription Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
13	rs63552063	chr11:63997567-63997568	Active TSS Weak transcription Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
14	rs79300997	chr11:63997587-63997588	Active TSS Weak transcription Flanking Active TSS Enhancers	TF binding region CpG island Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
15	rs577457546	chr11:63997644-63997645	Active TSS Weak transcription Flanking Active TSS Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	12 gene(s)	Overlapped CNVs	n/a
16	rs76497858	chr11:63997749-63997750	Active TSS Weak transcription Flanking Active TSS Enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	12 gene(s)	Overlapped CNVs	n/a
17	rs183362657	chr11:63997768-63997769	Active TSS Weak transcription Flanking Active TSS Enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	12 gene(s)	Overlapped CNVs	n/a
18	rs116750851	chr11:63997770-63997771	Active TSS Weak transcription Flanking Active TSS Enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	12 gene(s)	Overlapped CNVs	n/a
19	rs575903876	chr11:63997823-63997824	Active TSS Weak transcription Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	12 gene(s)	Overlapped CNVs	n/a
20	rs544872892	chr11:63997830-63997831	Active TSS Weak transcription Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	12 gene(s)	Overlapped CNVs	n/a
21	rs557832609	chr11:63997839-63997840	Active TSS Weak transcription Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	12 gene(s)	Overlapped CNVs	n/a
22	rs577705130	chr11:63997845-63997846	Active TSS Weak transcription Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	12 gene(s)	Overlapped CNVs	n/a
23	rs11311686	chr11:63997883-63997884	Active TSS Weak transcription Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	15 gene(s)	Overlapped CNVs	n/a
24	rs398016372	chr11:63997895-63997896	Active TSS Weak transcription Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	15 gene(s)	Overlapped CNVs	n/a
25	rs540365500	chr11:63997912-63997913	Active TSS Weak transcription Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	15 gene(s)	Overlapped CNVs	n/a
26	rs58040631	chr11:63997974-63997975	Active TSS Weak transcription Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	14 gene(s)	Overlapped CNVs	n/a
27	rs367799311	chr11:63997978-63997979	Active TSS Weak transcription Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	14 gene(s)	Overlapped CNVs	n/a
28	rs374783887	chr11:63998005-63998006	Active TSS Weak transcription Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	14 gene(s)	Overlapped CNVs	n/a
29	rs560171950	chr11:63998033-63998034	Active TSS Weak transcription Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	14 gene(s)	Overlapped CNVs	n/a
30	rs532741967	chr11:63998090-63998091	Active TSS Weak transcription Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	14 gene(s)	Overlapped CNVs	n/a
31	rs573626753	chr11:63998108-63998109	Active TSS Weak transcription Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	14 gene(s)	Overlapped CNVs	n/a
32	rs542826138	chr11:63998112-63998113	Active TSS Weak transcription Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	14 gene(s)	Overlapped CNVs	n/a
33	rs562506605	chr11:63998146-63998147	Active TSS Weak transcription Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	14 gene(s)	Overlapped CNVs	n/a
34	rs369204343	chr11:63998156-63998157	Active TSS Weak transcription Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	14 gene(s)	Overlapped CNVs	n/a
35	rs78309645	chr11:63998160-63998161	Active TSS Weak transcription Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	14 gene(s)	Overlapped CNVs	n/a
36	rs564172158	chr11:63998203-63998204	Active TSS Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Enhancers	TF binding region Chromatin interactive region	14 gene(s)	Overlapped CNVs	n/a
37	rs80058187	chr11:63998215-63998216	Active TSS Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Enhancers	TF binding region Chromatin interactive region	14 gene(s)	Overlapped CNVs	n/a
38	rs15706	chr11:63998240-63998241	Active TSS Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Enhancers	TF binding region Chromatin interactive region	14 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
39	rs566969222	chr11:63998250-63998251	Active TSS Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Enhancers	TF binding region CpG island Chromatin interactive region	14 gene(s)	Overlapped CNVs	n/a
40	rs535538545	chr11:63998270-63998271	Active TSS Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Enhancers	TF binding region CpG island Chromatin interactive region	13 gene(s)	Overlapped CNVs	n/a
41	rs549556603	chr11:63998286-63998287	Active TSS Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Enhancers	TF binding region CpG island Chromatin interactive region	13 gene(s)	Overlapped CNVs	n/a
42	rs569347865	chr11:63998324-63998325	Active TSS Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Enhancers	TF binding region Chromatin interactive region	13 gene(s)	Overlapped CNVs	n/a
43	rs368304871	chr11:63998331-63998332	Active TSS Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Enhancers	TF binding region Chromatin interactive region	13 gene(s)	Overlapped CNVs	n/a
44	rs1058137	chr11:63998385-63998386	Active TSS Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Enhancers	TF binding region Chromatin interactive region	13 gene(s)	Overlapped CNVs	n/a
45	rs3207600	chr11:63998394-63998395	Active TSS Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Enhancers	TF binding region Chromatin interactive region	13 gene(s)	Overlapped CNVs	n/a
46	rs563606445	chr11:63998430-63998431	Active TSS Weak transcription Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	13 gene(s)	Overlapped CNVs	n/a
47	rs538577724	chr11:63998451-63998452	Active TSS Weak transcription Flanking Active TSS Enhancers	TF binding region CpG island Chromatin interactive region	13 gene(s)	Overlapped CNVs	n/a
48	rs558475783	chr11:63998468-63998469	Active TSS Weak transcription Flanking Active TSS Enhancers	TF binding region CpG island Chromatin interactive region	13 gene(s)	Overlapped CNVs	n/a
49	rs577743455	chr11:63998487-63998488	Active TSS Weak transcription Flanking Active TSS Enhancers	TF binding region CpG island Chromatin interactive region	13 gene(s)	Overlapped CNVs	n/a
50	rs187325226	chr11:63998512-63998513	Active TSS Weak transcription Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	13 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:95)

Disease	PMID	Source
Medulloblastoma	21979893	CNVD
Gastric cancer	17908304	CNVD
Multiple myeloma	20724749	CNVD
Wilms tumour	21544195	CNVD
Autism	22495311	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Non-small cell lung cancer	21385341	CNVD
Intellectual disability	22102821	CNVD
Glioblastoma multiforme	21138945	CNVD
Acute myeloid leukemia	20729466	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Cancer	21637783	CNVD
Acute myeloid leukemia	16864856	CNVD
Chronic lymphocytic leukemia	21795749	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Neuroblastoma	21484798	CNVD
Ewing''s sarcoma	21437220	CNVD
Oral cancer	21386901	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	20837533	CNVD
Breast cancer	21264507	CNVD
Cervical cancer	21063398	CNVD
Glioblastoma multiforme	19960244	CNVD
Liposarcoma	21253554	CNVD
Neuroblastoma	18923524	CNVD
Neuroblastoma	18664255	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Multiple myeloma	17077331	CNVD
Neuroblastoma	17533364	CNVD
Breast cancer	21364760	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
small cell lung cancer	20016488	CNVD
Lung cancer	18438408	CNVD
Pituitary adenoma	18645599	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Prostate cancer	18632612	CNVD
Glioblastoma multiforme	21080181	CNVD
Smith-Lemli-Opitz syndrome	21572526	CNVD
Multiple myeloma	16461302	CNVD
Cancer	16751803	CNVD
Seminomas	18059402	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Metanephric adenoma	20802469	CNVD
Chordoma	21602918	CNVD
Melanoma	18172304	CNVD
Chordoma	18071362	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
ovarian endometriomas	16273235	CNVD
Breast cancer	21785460	CNVD
Breast cancer	16417655	CNVD
Myelofibrosis	22110671	CNVD
Primary central nervous system lymphoma	21088137	CNVD
Prostate cancer	17217626	CNVD
T-cell acute lymphoblastic leukemia	19406988	CNVD
Breast cancer	21045282	CNVD
Breast cancer	21806811	CNVD
Breast cancer	22002566	CNVD
Ductal carcinoma	18381933	CNVD
Retinoblastoma	22278416	CNVD
Breast cancer	20953835	CNVD
oto-dental syndrome	17656375	CNVD
Asthma	21956041	CNVD
Breast cancer	17603634	CNVD
Ovarian neoplasms	16753589	CNVD
Non-small cell lung cancer	20864512	CNVD
Hepatocellular carcinoma	16750200	CNVD
Cervical cancer	21062161	CNVD
Breast cancer	21509527	CNVD
Anaplastic thyroid cancer	18753363	CNVD
Prostate cancer	18779856	CNVD
Cancer	17160897	CNVD
Breast cancer	17001317	CNVD
Oral squamous cell carcinoma	16619035	CNVD
Intracranial aneurysm	16715129	CNVD
Colorectal cancer	16272173	CNVD
Primary mediastinal b-cell lymphoma	17728785	CNVD
Esophageal adenocarcinoma	18820669	CNVD
Colorectal cancer	16882699	CNVD
Berardinelli-seip congenital generalized lipodystrophy	17668395	CNVD
Spinal muscular atrophy	17668395	CNVD
Neonatal seizures	17668395	CNVD
Neonatal seizures	17668391	CNVD
Neuroticism	17667963	CNVD
Cancer	17916600	CNVD
Squamous cell cancer	19047905	CNVD
Multiple endocrine neoplasia type 1	19566914	CNVD
XY sex reversal	17503084	CNVD
Berardinelli-seip congenital generalized lipodystrophy	17668391	CNVD
Maculopathy	17646752	CNVD
Breast cancer	17899364	CNVD
Breast cancer	17157792	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD

Chromatin state (count:3692 , 50 per page) page: 1 2 3 4 5 6 7 ... 74

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:63994600-63997400	Weak transcription	iPS-18 Cell Line	embryonic stem cell
2	chr11:63994600-63997600	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
3	chr11:63994600-64001200	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
4	chr11:63995200-63997400	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
5	chr11:63995200-63997400	Enhancers	Primary T helper naive cells fromperipheralblood	blood
6	chr11:63995200-63997600	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
7	chr11:63996400-63997400	Enhancers	Primary monocytes fromperipheralblood	blood
8	chr11:63996400-63997400	Enhancers	Primary B cells from peripheral blood	blood
9	chr11:63996400-63997400	Enhancers	Primary T killer memory cells from peripheral blood	blood
10	chr11:63996400-63997400	Enhancers	Fetal Muscle Leg	muscle
11	chr11:63996600-63997400	Enhancers	Primary T helper naive cells from peripheral blood	blood
12	chr11:63996600-63997400	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
13	chr11:63996600-63997400	Genic enhancers	Primary Natural Killer cells fromperipheralblood	blood
14	chr11:63996600-63997400	Enhancers	Primary mononuclear cells fromperipheralblood	Blood
15	chr11:63996600-63997400	Enhancers	Placenta	Placenta
16	chr11:63996600-63997400	Genic enhancers	Fetal Stomach	stomach
17	chr11:63996600-63997400	Enhancers	Stomach Mucosa	stomach
18	chr11:63996600-63997400	Enhancers	HMEC	breast
19	chr11:63996600-63997600	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
20	chr11:63996600-63997600	Flanking Active TSS	Foreskin Fibroblast Primary Cells skin02	Skin
21	chr11:63996600-63997600	Enhancers	Aorta	Aorta
22	chr11:63996600-63997600	Enhancers	Fetal Heart	heart
23	chr11:63996600-63997600	Enhancers	Pancreas	Pancrea
24	chr11:63996600-63997600	Enhancers	Spleen	Spleen
25	chr11:63996600-63997800	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
26	chr11:63996600-63997800	Flanking Active TSS	Dnd41	blood
27	chr11:63996600-63997800	Flanking Active TSS	Hela-S3	cervix
28	chr11:63996800-63997400	Enhancers	ES-I3 Cell Line	embryonic stem cell
29	chr11:63996800-63997400	Enhancers	H1 Cell Line	embryonic stem cell
30	chr11:63996800-63997400	Genic enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
31	chr11:63996800-63997400	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
32	chr11:63996800-63997400	Transcr. at gene 5' and 3'	Foreskin Melanocyte Primary Cells skin01	Skin
33	chr11:63996800-63997400	Flanking Active TSS	Brain Germinal Matrix	brain
34	chr11:63996800-63997400	Flanking Active TSS	Brain Dorsolateral Prefrontal Cortex	brain
35	chr11:63996800-63997400	Enhancers	Duodenum Smooth Muscle	Duodenum
36	chr11:63996800-63997400	Enhancers	Esophagus	oesophagus
37	chr11:63996800-63997400	Genic enhancers	Fetal Adrenal Gland	Adrenal Gland
38	chr11:63996800-63997400	Enhancers	Left Ventricle	heart
39	chr11:63996800-63997600	Flanking Active TSS	Brain Hippocampus Middle	brain
40	chr11:63996800-63997600	Enhancers	Gastric	stomach
41	chr11:63996800-63997600	Enhancers	Lung	lung
42	chr11:63996800-63997600	Flanking Active TSS	Rectal Mucosa Donor 29	rectum
43	chr11:63996800-63997600	Flanking Active TSS	Skeletal Muscle Female	skeletal muscle
44	chr11:63996800-63997800	Flanking Active TSS	Primary T helper cells fromperipheralblood	blood
45	chr11:63996800-63997800	Flanking Active TSS	Brain Inferior Temporal Lobe	brain
46	chr11:63996800-63998000	Flanking Active TSS	Primary T helper cells PMA-I stimulated	--
47	chr11:63996800-63998000	Flanking Active TSS	Stomach Smooth Muscle	stomach
48	chr11:63996800-63998800	Flanking Active TSS	Primary T regulatory cells fromperipheralblood	blood
49	chr11:63997000-63997400	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
50	chr11:63997000-63997400	Enhancers	Cortex derived primary cultured neurospheres	brain

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