Variant report

Variant	rs3207600
Chromosome Location	chr11:63998394-63998395
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	TAF1	chr11:63997413-63998444	K562	blood:	n/a	n/a
2	POLR2A	chr11:63997440-63998700	GM19099	blood:	n/a	n/a
3	HCFC1	chr11:63996936-63998871	Hela-S3	cervix:	n/a	n/a
4	ZBTB7A	chr11:63997459-63998777	K562	blood:	n/a	chr11:63997789-63997800
5	POLR2A	chr11:63997488-63998402	GM12892	blood:	n/a	n/a
6	MAX	chr11:63997583-63998426	MCF-7	breast:	n/a	chr11:63997941-63997951
7	POLR2A	chr11:63997369-63998737	PFSK-1	brain:	n/a	n/a
8	YY1	chr11:63997637-63998660	SK-N-SH	brain:	n/a	chr11:63998314-63998325 chr11:63997998-63998007 chr11:63998317-63998326 chr11:63997993-63998007
9	POLR2A	chr11:63997443-63998736	Hela-S3	cervix:	n/a	n/a
10	ELF1	chr11:63997167-63998539	GM12878	blood:	n/a	chr11:63997996-63998008
11	MYC	chr11:63997544-63998514	K562	blood:	n/a	chr11:63997941-63997951
12	CHD2	chr11:63997742-63998531	GM12878	blood:	n/a	n/a
13	PBX3	chr11:63997536-63998540	SK-N-SH	brain:	n/a	n/a
14	ELF1	chr11:63997512-63998485	GM12878	blood:	n/a	chr11:63997996-63998008
15	POLR2A	chr11:63997594-63998524	HUVEC	blood vessel:	n/a	n/a
16	MAX	chr11:63997499-63998719	A549	lung:	n/a	chr11:63997941-63997951
17	MYC	chr11:63997512-63998761	NB4	blood:	n/a	chr11:63997941-63997951
18	POLR2A	chr11:63997499-63998747	HL-60	blood:	n/a	n/a
19	REST	chr11:63997146-63998905	H1-neurons	neurons:	n/a	chr11:63997990-63998008 chr11:63997768-63997777
20	POLR2A	chr11:63996671-63998678	GM19193	blood:	n/a	n/a
21	MTA3	chr11:63997495-63998811	GM12878	blood:	n/a	n/a
22	MAX	chr11:63997440-63998675	K562	blood:	n/a	chr11:63997941-63997951
23	POLR2A	chr11:63997592-63998638	Hela-S3	cervix:	n/a	n/a
24	POLR2A	chr11:63996500-63998737	SK-N-MC	brain:	n/a	n/a
25	PBX3	chr11:63997710-63998531	A549	lung:	n/a	n/a
26	YY1	chr11:63997736-63998432	H1-hESC	embryonic stem cell:	n/a	chr11:63998314-63998325 chr11:63997998-63998007 chr11:63998317-63998326 chr11:63997993-63998007
27	POLR2A	chr11:63997132-63998781	GM12878	blood:	n/a	n/a
28	MAZ	chr11:63997288-63998781	IMR90	lung:	n/a	chr11:63997941-63997951
29	POLR2A	chr11:63997371-63998843	HUVEC	blood vessel:	n/a	n/a
30	ZBTB7A	chr11:63997347-63998822	K562	blood:	n/a	chr11:63997789-63997800
31	YY1	chr11:63997790-63998417	A549	lung:	n/a	chr11:63998314-63998325 chr11:63997998-63998007 chr11:63998317-63998326 chr11:63997993-63998007
32	RUNX3	chr11:63998283-63998803	GM12878	blood:	n/a	n/a
33	SIN3AK20	chr11:63997406-63998546	MCF-7	breast:	n/a	n/a
34	POLR2A	chr11:63997327-63998698	PFSK-1	brain:	n/a	n/a
35	PBX3	chr11:63997506-63998597	SK-N-SH	brain:	n/a	n/a
36	JUND	chr11:63998197-63998574	A549	lung:	n/a	chr11:63998314-63998323
37	POLR2A	chr11:63997651-63998467	A549	lung:	n/a	n/a
38	RCOR1	chr11:63997580-63998802	K562	blood:	n/a	n/a
39	MAX	chr11:63997705-63998512	A549	lung:	n/a	chr11:63997941-63997951
40	POLR2A	chr11:63996332-63998544	K562	blood:	n/a	n/a
41	POLR2A	chr11:63997867-63998416	A549	lung:	n/a	n/a
42	POLR2A	chr11:63997187-63998690	K562	blood:	n/a	n/a
43	YY1	chr11:63997626-63998522	ECC-1	luminal epithelium:	n/a	chr11:63998314-63998325 chr11:63997998-63998007 chr11:63998317-63998326 chr11:63997993-63998007
44	BCL3	chr11:63997495-63998663	A549	lung:	n/a	n/a
45	POLR2A	chr11:63997135-63998556	MCF10A-Er-Src	breast:	n/a	n/a
46	MXI1	chr11:63997124-63998848	SK-N-SH	brain:	n/a	n/a
47	YY1	chr11:63997715-63998457	SK-N-SH	brain:	n/a	chr11:63998314-63998325 chr11:63997998-63998007 chr11:63998317-63998326 chr11:63997993-63998007
48	POLR2A	chr11:63997257-63998780	U87	brain:	n/a	n/a
49	YY1	chr11:63997618-63998437	SK-N-SH_RA	brain:	n/a	chr11:63998314-63998325 chr11:63997998-63998007 chr11:63998317-63998326 chr11:63997993-63998007
50	POLR2A	chr11:63998308-63998430	H1-hESC	embryonic stem cell:	n/a	n/a

No.	Distal block	Cell Line	Cell type
1	chr11:63997846..63998525-chr20:47894885..47895636,2	Hela-S3	cervix:
2	chr11:63994977..63999244-chr11:64052371..64054935,4	MCF-7	breast:
3	chr11:63951708..63954659-chr11:63996505..63999341,3	MCF-7	breast:
4	chr11:63931926..63934218-chr11:63996442..63998414,3	MCF-7	breast:
5	chr11:63997014..63999742-chr11:64070693..64073511,5	MCF-7	breast:
6	chr11:63931932..63936018-chr11:63996543..64001155,4	MCF-7	breast:
7	chr11:63997990..64000103-chr11:64070945..64073334,3	MCF-7	breast:
8	chr11:63994757..64000133-chr11:64050787..64054663,5	MCF-7	breast:
9	chr11:63997112..63999658-chr11:64063804..64066136,2	MCF-7	breast:

Variant related genes	Relation type
VEGFB	TF binding region
DNAJC4	TF binding region
TRPT1	TF binding region
ENSG00000124201	Chromatin interaction
ENSG00000209042	Chromatin interaction
ENSG00000182450	Chromatin interaction
ENSG00000177410	Chromatin interaction
ENSG00000168439	Chromatin interaction
ENSG00000219435	Chromatin interaction
ENSG00000173153	Chromatin interaction
ENSG00000133315	Chromatin interaction
ENSG00000173264	Chromatin interaction
ENSG00000002330	Chromatin interaction

Extended variants
information (count: 38 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:38 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv897631	chr11:63664882-64129722	Flanking Active TSS Strong transcription Enhancers Weak transcription Active TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	254 gene(s)	inside rSNPs	diseases
2	esv1802079	chr11:63746066-64151373	Bivalent Enhancer Flanking Active TSS Weak transcription Enhancers Genic enhancers Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	247 gene(s)	inside rSNPs	diseases
3	nsv897646	chr11:63754986-64150370	Strong transcription Weak transcription Bivalent Enhancer Flanking Active TSS Enhancers Transcr. at gene 5' and 3' Active TSS Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	245 gene(s)	inside rSNPs	diseases
4	nsv1035875	chr11:63800238-64132030	Weak transcription Enhancers Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers Active TSS Bivalent Enhancer Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	234 gene(s)	inside rSNPs	diseases
5	nsv469961	chr11:63822940-64085967	Weak transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' Enhancers Active TSS Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh Strong transcription ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	224 gene(s)	inside rSNPs	diseases
6	nsv897660	chr11:63860826-64125142	Weak transcription Active TSS Enhancers Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers Strong transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	231 gene(s)	inside rSNPs	diseases
7	nsv897661	chr11:63863405-64129722	Flanking Active TSS Enhancers Weak transcription Active TSS Bivalent/Poised TSS Strong transcription Transcr. at gene 5' and 3' Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	233 gene(s)	inside rSNPs	diseases
8	nsv897662	chr11:63889749-64150370	Flanking Active TSS Enhancers Weak transcription Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh Active TSS Strong transcription Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	237 gene(s)	inside rSNPs	diseases
9	nsv897664	chr11:63919742-64150370	Weak transcription Strong transcription Flanking Active TSS Enhancers Genic enhancers Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	237 gene(s)	inside rSNPs	diseases
10	nsv468592	chr11:63924446-64042997	Enhancers Flanking Active TSS Strong transcription Active TSS Weak transcription ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	166 gene(s)	inside rSNPs	diseases
11	nsv555184	chr11:63924446-64042997	Genic enhancers Enhancers Flanking Active TSS Active TSS Strong transcription Weak transcription Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	166 gene(s)	inside rSNPs	diseases
12	nsv897665	chr11:63927695-64026144	Enhancers Weak transcription Flanking Active TSS Strong transcription Active TSS Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	155 gene(s)	inside rSNPs	diseases
13	nsv897666	chr11:63929493-64026144	Enhancers Active TSS Flanking Active TSS Weak transcription Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS Strong transcription Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	155 gene(s)	inside rSNPs	diseases
14	nsv869944	chr11:63932152-64123062	Weak transcription Enhancers Strong transcription Flanking Active TSS Genic enhancers Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	227 gene(s)	inside rSNPs	diseases
15	nsv468593	chr11:63941734-64089874	Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS Enhancers Genic enhancers Strong transcription Weak transcription Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	212 gene(s)	inside rSNPs	diseases
16	nsv555185	chr11:63941734-64089874	Weak transcription Enhancers Active TSS Flanking Active TSS Genic enhancers Bivalent Enhancer Strong transcription Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	212 gene(s)	inside rSNPs	diseases
17	nsv555186	chr11:63949095-64097233	Weak transcription Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Enhancers Strong transcription Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	212 gene(s)	inside rSNPs	diseases
18	nsv468595	chr11:63953121-64027888	Enhancers Flanking Active TSS Active TSS Weak transcription Genic enhancers Strong transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	146 gene(s)	inside rSNPs	diseases
19	nsv555187	chr11:63953121-64027888	Strong transcription Weak transcription Transcr. at gene 5' and 3' Active TSS Enhancers Flanking Active TSS Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	146 gene(s)	inside rSNPs	diseases
20	nsv897667	chr11:63964657-64078380	Enhancers Strong transcription Flanking Active TSS Weak transcription Active TSS Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	141 gene(s)	inside rSNPs	diseases
21	nsv897668	chr11:63964657-64085298	Weak transcription Genic enhancers Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Strong transcription Bivalent/Poised TSS Enhancers Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	163 gene(s)	inside rSNPs	diseases
22	nsv897669	chr11:63964657-64089874	Genic enhancers Weak transcription Strong transcription Flanking Bivalent TSS/Enh Flanking Active TSS Enhancers Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	164 gene(s)	inside rSNPs	diseases
23	nsv897670	chr11:63964657-64097233	Flanking Active TSS Weak transcription Active TSS Enhancers Strong transcription Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	164 gene(s)	inside rSNPs	diseases
24	nsv897671	chr11:63964657-64150370	Active TSS Flanking Active TSS Genic enhancers Weak transcription Enhancers Strong transcription Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	179 gene(s)	inside rSNPs	diseases
25	nsv541061	chr11:63970174-64010995	Strong transcription Active TSS Flanking Active TSS Weak transcription Enhancers Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	76 gene(s)	inside rSNPs	diseases
26	nsv832186	chr11:63972260-64170059	Active TSS Genic enhancers Weak transcription Flanking Active TSS Enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	180 gene(s)	inside rSNPs	diseases
27	nsv897672	chr11:63979643-64082807	Enhancers Flanking Active TSS Genic enhancers Bivalent Enhancer Weak transcription Strong transcription Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	140 gene(s)	inside rSNPs	diseases
28	esv1802320	chr11:63987425-64154633	Active TSS Enhancers Flanking Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Weak transcription Strong transcription Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	178 gene(s)	inside rSNPs	diseases
29	nsv897673	chr11:63991581-64018687	Flanking Active TSS Bivalent/Poised TSS Genic enhancers Weak transcription Active TSS Enhancers Transcr. at gene 5' and 3' Strong transcription Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	92 gene(s)	inside rSNPs	diseases
30	esv992196	chr11:63992534-64002355	Active TSS Enhancers Flanking Active TSS Weak transcription Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Strong transcription Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	35 gene(s)	inside rSNPs	diseases
31	nsv897674	chr11:63994692-64006292	Genic enhancers Active TSS Strong transcription Weak transcription Transcr. at gene 5' and 3' Enhancers Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	27 gene(s)	inside rSNPs	diseases
32	nsv897675	chr11:63994692-64018687	Strong transcription Active TSS Flanking Active TSS Weak transcription Transcr. at gene 5' and 3' Enhancers Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	82 gene(s)	inside rSNPs	diseases
33	nsv897676	chr11:63994692-64022459	Weak transcription Flanking Active TSS Strong transcription Enhancers Bivalent/Poised TSS Active TSS Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	85 gene(s)	inside rSNPs	diseases
34	nsv897677	chr11:63994692-64023971	Flanking Active TSS Weak transcription Strong transcription Active TSS Transcr. at gene 5' and 3' Enhancers Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	85 gene(s)	inside rSNPs	diseases
35	nsv897678	chr11:63994692-64026144	Enhancers Active TSS Strong transcription Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh Weak transcription Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	85 gene(s)	inside rSNPs	diseases
36	nsv897679	chr11:63994692-64150370	Enhancers Weak transcription Active TSS Bivalent/Poised TSS Flanking Active TSS Bivalent Enhancer Strong transcription Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	169 gene(s)	inside rSNPs	diseases
37	nsv897680	chr11:63997338-64022459	Active TSS Enhancers Flanking Active TSS Transcr. at gene 5' and 3' Strong transcription Weak transcription Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	82 gene(s)	inside rSNPs	diseases
38	nsv897681	chr11:63998240-64022459	Flanking Active TSS Weak transcription Active TSS Enhancers Genic enhancers Transcr. at gene 5' and 3' Strong transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	82 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:127 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:63994600-64001200	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
2	chr11:63996800-63998800	Flanking Active TSS	Primary T regulatory cells fromperipheralblood	blood
3	chr11:63997200-63998400	Active TSS	NHLF	lung
4	chr11:63997200-63998800	Flanking Active TSS	Primary T cells fromperipheralblood	blood
5	chr11:63997200-63998800	Flanking Active TSS	Primary hematopoietic stem cells	blood
6	chr11:63997200-63998800	Flanking Active TSS	Foreskin Fibroblast Primary Cells skin01	Skin
7	chr11:63997200-63998800	Active TSS	Pancreatic Islets	Pancreatic Islet
8	chr11:63997200-63998800	Flanking Active TSS	Fetal Thymus	thymus
9	chr11:63997200-63999400	Active TSS	HUES64 Cell Line	embryonic stem cell
10	chr11:63997400-63998400	Active TSS	iPS DF 19.11 Cell Line	embryonic stem cell
11	chr11:63997400-63998400	Active TSS	Brain Dorsolateral Prefrontal Cortex	brain
12	chr11:63997400-63998400	Active TSS	Brain Substantia Nigra	brain
13	chr11:63997400-63998600	Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
14	chr11:63997400-63998600	Active TSS	Foreskin Keratinocyte Primary Cells skin03	Skin
15	chr11:63997400-63998600	Flanking Active TSS	Primary mononuclear cells fromperipheralblood	Blood
16	chr11:63997400-63998800	Active TSS	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
17	chr11:63997400-63998800	Active TSS	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
18	chr11:63997400-63998800	Active TSS	HUES48 Cell Line	embryonic stem cell
19	chr11:63997400-63998800	Active TSS	iPS-15b Cell Line	embryonic stem cell
20	chr11:63997400-63998800	Active TSS	iPS-20b Cell Line	embryonic stem cell
21	chr11:63997400-63998800	Flanking Active TSS	Cortex derived primary cultured neurospheres	brain
22	chr11:63997400-63998800	Active TSS	Brain Germinal Matrix	brain
23	chr11:63997400-63998800	Active TSS	Fetal Kidney	kidney
24	chr11:63997400-63998800	Active TSS	Left Ventricle	heart
25	chr11:63997400-63998800	Active TSS	Ovary	ovary
26	chr11:63997400-63998800	Active TSS	Psoas Muscle	Psoas
27	chr11:63997400-63998800	Flanking Active TSS	HMEC	breast
28	chr11:63997400-63999200	Active TSS	ES-I3 Cell Line	embryonic stem cell
29	chr11:63997400-63999200	Active TSS	Foreskin Melanocyte Primary Cells skin01	Skin
30	chr11:63997600-63998400	Active TSS	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
31	chr11:63997600-63998400	Active TSS	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
32	chr11:63997600-63998400	Active TSS	Primary T cells from cord blood	blood
33	chr11:63997600-63998400	Active TSS	Primary T helper naive cells fromperipheralblood	blood
34	chr11:63997600-63998400	Active TSS	Primary T cells effector/memory enriched fromperipheralblood	blood
35	chr11:63997600-63998400	Active TSS	Primary T killer memory cells from peripheral blood	blood
36	chr11:63997600-63998400	Active TSS	Liver	Liver
37	chr11:63997600-63998400	Active TSS	Brain Angular Gyrus	brain
38	chr11:63997600-63998400	Active TSS	Brain Cingulate Gyrus	brain
39	chr11:63997600-63998400	Active TSS	Colon Smooth Muscle	Colon
40	chr11:63997600-63998400	Active TSS	Esophagus	oesophagus
41	chr11:63997600-63998400	Active TSS	Fetal Intestine Small	intestine
42	chr11:63997600-63998400	Active TSS	Fetal Lung	lung
43	chr11:63997600-63998400	Active TSS	Lung	lung
44	chr11:63997600-63998400	Active TSS	Skeletal Muscle Female	skeletal muscle
45	chr11:63997600-63998400	Active TSS	Small Intestine	intestine
46	chr11:63997600-63998400	Active TSS	Stomach Mucosa	stomach
47	chr11:63997600-63998400	Active TSS	Spleen	Spleen
48	chr11:63997600-63998400	Active TSS	K562	blood
49	chr11:63997600-63998600	Active TSS	Primary T helper naive cells from peripheral blood	blood
50	chr11:63997600-63998600	Active TSS	Ganglion Eminence derived primary cultured neurospheres	brain

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links