Variant report

rSNPs within LD-proxies of this variant (count:36)

rs_ID	r²[population]
rs10732479	1.00[JPT][hapmap];0.92[YRI][hapmap];0.91[AFR][1000 genomes];0.85[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10734366	1.00[JPT][hapmap]
rs10742127	1.00[JPT][hapmap]
rs10742128	1.00[JPT][hapmap]
rs10767499	0.89[ASN][1000 genomes]
rs10767500	1.00[ASN][1000 genomes]
rs10834896	0.90[ASN][1000 genomes]
rs10834897	1.00[JPT][hapmap]
rs10834898	1.00[JPT][hapmap]
rs11029100	0.89[ASN][1000 genomes]
rs1387503	1.00[JPT][hapmap]
rs1387506	1.00[JPT][hapmap];1.00[YRI][hapmap];0.84[AFR][1000 genomes];0.85[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1387507	1.00[JPT][hapmap]
rs1948211	1.00[ASN][1000 genomes]
rs2035732	1.00[ASN][1000 genomes]
rs2035733	1.00[ASN][1000 genomes]
rs4104018	1.00[ASN][1000 genomes]
rs4363548	1.00[ASN][1000 genomes]
rs4469842	1.00[ASN][1000 genomes]
rs4575221	1.00[ASN][1000 genomes]
rs6484193	1.00[JPT][hapmap]
rs7101817	1.00[JPT][hapmap]
rs7105188	1.00[JPT][hapmap]
rs7105339	1.00[JPT][hapmap]
rs7115939	1.00[JPT][hapmap]
rs7116083	1.00[JPT][hapmap]
rs7119696	1.00[JPT][hapmap]
rs7120325	1.00[ASN][1000 genomes]
rs7123678	1.00[JPT][hapmap]
rs7924859	1.00[ASN][1000 genomes]
rs7929415	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7938835	1.00[ASN][1000 genomes]
rs988513	1.00[JPT][hapmap]
rs988514	1.00[JPT][hapmap]
rs988515	1.00[JPT][hapmap]
rs988516	1.00[JPT][hapmap]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2760599	chr11:25186984-26159450	Enhancers Flanking Active TSS Weak transcription ZNF genes & repeats Genic enhancers Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
2	nsv1046507	chr11:25469712-26111707	Weak transcription Enhancers ZNF genes & repeats Active TSS Flanking Active TSS Bivalent Enhancer Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
3	nsv1041778	chr11:25898574-26098141	Weak transcription Enhancers Bivalent/Poised TSS Flanking Active TSS ZNF genes & repeats Active TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:26051600-26055000	Enhancers	Hela-S3	cervix

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