The 2.0 version of rSNPBase

Variant report

Variant rs1909195
Chromosome Location chr1:222797327-222797328
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:222792400-222816600 Weak transcription Small Intestine intestine
2 chr1:222792600-222800000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
3 chr1:222792600-222801400 Weak transcription Lung lung
4 chr1:222792600-222802200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
5 chr1:222792600-222802200 Weak transcription Aorta Aorta
6 chr1:222792600-222816600 Weak transcription ES-WA7 Cell Line embryonic stem cell
7 chr1:222792600-222817000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
8 chr1:222792800-222802000 Weak transcription Colonic Mucosa Colon
9 chr1:222793000-222798800 Weak transcription iPS-15b Cell Line embryonic stem cell
10 chr1:222793000-222799000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
11 chr1:222793000-222799800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
12 chr1:222793000-222800200 Weak transcription Placenta Amnion Placenta Amnion
13 chr1:222793000-222802200 Weak transcription HSMMtube muscle
14 chr1:222793200-222797600 Weak transcription Rectal Smooth Muscle rectum
15 chr1:222793200-222797800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
16 chr1:222793200-222797800 Weak transcription Fetal Lung lung
17 chr1:222793200-222797800 Weak transcription HUVEC blood vessel
18 chr1:222793200-222798400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
19 chr1:222793200-222799400 Weak transcription H9 Cell Line embryonic stem cell
20 chr1:222793200-222799400 Weak transcription Thymus Thymus
21 chr1:222793200-222800000 Weak transcription Pancreas Pancrea
22 chr1:222793200-222800000 Weak transcription Spleen Spleen
23 chr1:222793200-222800000 Weak transcription HMEC breast
24 chr1:222793200-222800000 Weak transcription NHLF lung
25 chr1:222793200-222800200 Weak transcription NHEK skin
26 chr1:222793200-222800400 Weak transcription Muscle Satellite Cultured Cells --
27 chr1:222793200-222801000 Weak transcription ES-I3 Cell Line embryonic stem cell
28 chr1:222793200-222801400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
29 chr1:222793200-222802200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
30 chr1:222793200-222802200 Weak transcription Fetal Intestine Small intestine
31 chr1:222793200-222802200 Weak transcription Right Ventricle heart
32 chr1:222793200-222802800 Weak transcription Gastric stomach
33 chr1:222793200-222816600 Weak transcription Primary neutrophils fromperipheralblood blood
34 chr1:222793200-222816600 Weak transcription Hela-S3 cervix
35 chr1:222793400-222800000 Weak transcription Brain Substantia Nigra brain
36 chr1:222793600-222816600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
37 chr1:222793800-222797800 Weak transcription Primary T killer memory cells from peripheral blood blood
38 chr1:222794000-222800600 Weak transcription Primary T killer naive cells fromperipheralblood blood
39 chr1:222794000-222806800 Strong transcription Primary T cells from cord blood blood
40 chr1:222794200-222797800 Weak transcription Primary T helper naive cells from peripheral blood blood
41 chr1:222794200-222798400 Strong transcription K562 blood
42 chr1:222794200-222802600 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
43 chr1:222794200-222805000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
44 chr1:222794400-222800000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
45 chr1:222794600-222800000 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
46 chr1:222794600-222800000 Strong transcription Liver Liver
47 chr1:222794600-222801400 Weak transcription GM12878-XiMat blood
48 chr1:222794600-222803600 Strong transcription Breast Myoepithelial Primary Cells Breast
49 chr1:222794600-222807200 Strong transcription Fetal Thymus thymus
50 chr1:222794600-222809800 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin

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Last update: Aug 31, 2015