Variant report

No.	Distal block	Cell Line	Cell type
1	chr9:104173472..104176121-chr9:104187429..104190280,2	MCF-7	breast:
2	chr9:104153060..104154833-chr9:104173382..104175911,2	MCF-7	breast:
3	chr9:104165233..104170505-chr9:104171045..104175682,8	MCF-7	breast:
4	chr9:104171442..104174138-chr9:104174646..104177184,3	MCF-7	breast:

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1046975	chr9:104167583-104659873	Weak transcription Flanking Active TSS Active TSS Enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Strong transcription ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	15 gene(s)	inside rSNPs	diseases
2	nsv893626	chr9:104172936-104324545	Enhancers Active TSS Flanking Active TSS Bivalent Enhancer Weak transcription Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	12 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:20 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:104164800-104174200	ZNF genes & repeats	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
2	chr9:104164800-104174200	ZNF genes & repeats	Brain Hippocampus Middle	brain
3	chr9:104164800-104175400	ZNF genes & repeats	Fetal Muscle Leg	muscle
4	chr9:104165400-104176200	ZNF genes & repeats	Adipose Nuclei	Adipose
5	chr9:104165600-104178200	ZNF genes & repeats	Duodenum Smooth Muscle	Duodenum
6	chr9:104172000-104176000	Weak transcription	Aorta	Aorta
7	chr9:104172000-104177800	Weak transcription	Lung	lung
8	chr9:104172000-104179200	Weak transcription	Placenta Amnion	Placenta Amnion
9	chr9:104172000-104179400	Weak transcription	Pancreas	Pancrea
10	chr9:104172000-104180800	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
11	chr9:104172800-104175000	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
12	chr9:104172800-104175200	Weak transcription	Fetal Brain Male	brain
13	chr9:104172800-104180800	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
14	chr9:104172800-104181200	Weak transcription	Fetal Heart	heart
15	chr9:104172800-104187000	Weak transcription	Left Ventricle	heart
16	chr9:104173600-104175200	Weak transcription	Ovary	ovary
17	chr9:104173600-104175400	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
18	chr9:104173600-104177600	Weak transcription	HepG2	liver
19	chr9:104173600-104180400	Weak transcription	Muscle Satellite Cultured Cells	--
20	chr9:104174000-104175000	Weak transcription	Fetal Lung	lung

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