Variant report

Variant	rs1919504
Chromosome Location	chr4:171311011-171311012
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 56 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:56)

rs_ID	r²[population]
rs11132848	0.93[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs11132849	0.88[AMR][1000 genomes]
rs11132850	0.93[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs11727765	0.93[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs12640340	0.93[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs12715911	0.93[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs12715912	0.93[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs12715913	0.93[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs13106214	0.93[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs13107828	0.93[AMR][1000 genomes]
rs13141317	0.93[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs13147596	0.93[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs13149636	0.93[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs13434911	0.93[AMR][1000 genomes]
rs13434915	0.93[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs1406518	0.93[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs1919500	0.93[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs1919501	0.93[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs1919503	0.93[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs1919505	0.88[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs2176964	0.93[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs2176965	0.93[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs2176966	0.93[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs2176967	0.93[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs2331912	0.93[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs2331914	0.93[AMR][1000 genomes]
rs2331915	0.93[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs2877518	0.93[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs4321601	0.93[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs4597785	0.93[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs4692604	0.88[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs4692605	0.93[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs4692828	0.93[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs4692831	0.93[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs6553513	0.93[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs6553517	0.93[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs6553518	0.93[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs6815451	0.88[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs6826287	0.93[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs6843666	0.93[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs7655336	0.93[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs7655750	0.93[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs7656816	0.93[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs7665189	0.93[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs7665574	0.93[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs7665609	0.93[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs7668801	0.93[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs7672355	0.88[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs7672596	0.88[AMR][1000 genomes]
rs7675630	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7684984	0.93[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs7685034	0.93[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs7685794	0.93[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs7693095	0.93[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7693311	0.93[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs9684346	0.93[AMR][1000 genomes];0.85[EUR][1000 genomes]

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:171308200-171311200	Weak transcription	NHDF-Ad	bronchial
2	chr4:171308200-171311600	Weak transcription	Muscle Satellite Cultured Cells	--
3	chr4:171308400-171311200	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
4	chr4:171308400-171312000	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
5	chr4:171309400-171311200	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
6	chr4:171310600-171311600	Weak transcription	NHEK	skin
7	chr4:171310800-171311600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
8	chr4:171311000-171311400	Weak transcription	HMEC	breast

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