Variant report

Variant	rs7693095
Chromosome Location	chr4:171310593-171310594
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 57 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:57)

rs_ID	r²[population]
rs11132848	1.00[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs11132849	0.94[AMR][1000 genomes]
rs11132850	1.00[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs11727765	1.00[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs12640340	1.00[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs12715911	1.00[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs12715912	1.00[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs12715913	1.00[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs13106214	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs13107828	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs13141317	1.00[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs13147596	1.00[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs13149636	1.00[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs13434911	1.00[AMR][1000 genomes]
rs13434915	1.00[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs1406518	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs1919500	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs1919501	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs1919503	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs1919504	0.93[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs1919505	0.94[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs2176964	1.00[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs2176965	1.00[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs2176966	1.00[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs2176967	1.00[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs2331912	1.00[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs2331914	1.00[AMR][1000 genomes]
rs2331915	1.00[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs2877518	1.00[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs4321601	1.00[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs4597785	1.00[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs4692604	0.94[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs4692605	1.00[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs4692828	1.00[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs4692831	1.00[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs6553513	1.00[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs6553517	1.00[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs6553518	1.00[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs6553520	0.81[AFR][1000 genomes]
rs6815451	0.94[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs6826287	1.00[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs6843666	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs7655336	1.00[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs7655750	1.00[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs7656816	1.00[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs7665189	1.00[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs7665574	1.00[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs7665609	1.00[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs7668801	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs7672355	0.94[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs7672596	0.94[AMR][1000 genomes]
rs7675630	0.93[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7684984	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs7685034	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs7685794	1.00[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs7693311	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs9684346	1.00[AMR][1000 genomes];0.85[EUR][1000 genomes]

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:171308200-171311200	Weak transcription	NHDF-Ad	bronchial
2	chr4:171308200-171311600	Weak transcription	Muscle Satellite Cultured Cells	--
3	chr4:171308400-171311200	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
4	chr4:171308400-171312000	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
5	chr4:171309000-171311000	Enhancers	HMEC	breast
6	chr4:171309200-171310600	Enhancers	NHEK	skin
7	chr4:171309200-171310800	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
8	chr4:171309400-171311200	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
9	chr4:171310400-171311000	Enhancers	Fetal Brain Male	brain

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links