The 2.0 version of rSNPBase

Variant report

Variant rs192106089
Chromosome Location chr7:86970396-86970397
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:104 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:86951000-86972600 Weak transcription Fetal Kidney kidney
2 chr7:86958200-86970800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
3 chr7:86958400-86970400 Weak transcription Pancreas Pancrea
4 chr7:86958400-86972600 Weak transcription Osteobl bone
5 chr7:86958600-86971000 Weak transcription Pancreatic Islets Pancreatic Islet
6 chr7:86958800-86971200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
7 chr7:86958800-86972600 Weak transcription Primary T helper naive cells from peripheral blood blood
8 chr7:86959000-86970400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
9 chr7:86959000-86973200 Weak transcription A549 lung
10 chr7:86959000-86973400 Weak transcription Brain Hippocampus Middle brain
11 chr7:86959400-86970400 Weak transcription Fetal Muscle Trunk muscle
12 chr7:86959400-86970600 Weak transcription Placenta Amnion Placenta Amnion
13 chr7:86959400-86972600 Weak transcription Brain Cingulate Gyrus brain
14 chr7:86959400-86973800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
15 chr7:86959400-86973800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
16 chr7:86959400-86973800 Weak transcription Thymus Thymus
17 chr7:86959400-86974200 Weak transcription Small Intestine intestine
18 chr7:86959400-86974400 Weak transcription Spleen Spleen
19 chr7:86959600-86970400 Weak transcription Sigmoid Colon Sigmoid Colon
20 chr7:86959600-86973000 Weak transcription Primary T helper naive cells fromperipheralblood blood
21 chr7:86959600-86973400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
22 chr7:86959600-86974200 Weak transcription Colonic Mucosa Colon
23 chr7:86959800-86971200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
24 chr7:86959800-86974200 Weak transcription Esophagus oesophagus
25 chr7:86959800-86974200 Weak transcription Skeletal Muscle Female skeletal muscle
26 chr7:86960000-86971800 Weak transcription Cortex derived primary cultured neurospheres brain
27 chr7:86960000-86972600 Weak transcription Duodenum Smooth Muscle Duodenum
28 chr7:86960000-86973600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
29 chr7:86960400-86971200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
30 chr7:86960600-86970400 Weak transcription Fetal Thymus thymus
31 chr7:86960600-86971000 Weak transcription HMEC breast
32 chr7:86960600-86973800 Weak transcription Breast Myoepithelial Primary Cells Breast
33 chr7:86960600-86974200 Weak transcription Placenta Placenta
34 chr7:86960600-86974200 Weak transcription Lung lung
35 chr7:86961200-86973400 Weak transcription Primary T killer memory cells from peripheral blood blood
36 chr7:86963000-86972800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
37 chr7:86963600-86973800 Weak transcription HSMM muscle
38 chr7:86963600-86974200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
39 chr7:86964000-86970600 Weak transcription Fetal Heart heart
40 chr7:86964000-86971400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
41 chr7:86964000-86972600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
42 chr7:86964000-86974200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
43 chr7:86964400-86972600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
44 chr7:86964600-86973600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
45 chr7:86964600-86973800 Weak transcription H1 Cell Line embryonic stem cell
46 chr7:86964800-86970600 Strong transcription Primary Natural Killer cells fromperipheralblood blood
47 chr7:86965400-86970800 Strong transcription Primary T cells fromperipheralblood blood
48 chr7:86965400-86970800 Weak transcription NHLF lung
49 chr7:86965400-86974000 Weak transcription Primary monocytes fromperipheralblood blood
50 chr7:86965400-86974200 Weak transcription HSMMtube muscle

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Last update: Aug 31, 2015