Variant report

Variant	rs192356753
Chromosome Location	chr4:124938481-124938482
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 5 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv34581	chr4:124271321-125247395	Flanking Bivalent TSS/Enh Active TSS Enhancers Flanking Active TSS Weak transcription ZNF genes & repeats Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3' Strong transcription Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	42 gene(s)	inside rSNPs	diseases
2	nsv830049	chr4:124793932-124955708	Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats Bivalent Enhancer	Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
3	nsv868977	chr4:124841128-125550637	Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats Strong transcription Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	16 gene(s)	inside rSNPs	diseases
4	nsv879879	chr4:124893772-124971109	Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Active TSS	Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
5	nsv822716	chr4:124938146-124938615	Enhancers Weak transcription Flanking Active TSS Active TSS	n/a	n/a	inside rSNPs	n/a

No data

Chromatin state (count:16 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:124935400-124941400	Weak transcription	Aorta	Aorta
2	chr4:124935600-124939800	Weak transcription	Esophagus	oesophagus
3	chr4:124937000-124940000	Enhancers	Stomach Mucosa	stomach
4	chr4:124938000-124938800	Enhancers	Fetal Intestine Large	intestine
5	chr4:124938200-124938800	Enhancers	NHLF	lung
6	chr4:124938400-124938600	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
7	chr4:124938400-124938600	Enhancers	Psoas Muscle	Psoas
8	chr4:124938400-124938600	Enhancers	Hela-S3	cervix
9	chr4:124938400-124938800	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
10	chr4:124938400-124938800	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
11	chr4:124938400-124938800	Active TSS	Fetal Brain Male	brain
12	chr4:124938400-124938800	Flanking Active TSS	Fetal Lung	lung
13	chr4:124938400-124938800	Enhancers	Fetal Muscle Leg	muscle
14	chr4:124938400-124939000	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
15	chr4:124938400-124939800	Weak transcription	Fetal Intestine Small	intestine
16	chr4:124938400-124940200	Enhancers	NHDF-Ad	bronchial

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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