The 2.0 version of rSNPBase

Variant report

Variant rs1925034
Chromosome Location chr1:157982579-157982580
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:86 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:157965800-157983200 Weak transcription Dnd41 blood
2 chr1:157969000-157988000 Weak transcription Psoas Muscle Psoas
3 chr1:157975400-157996800 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
4 chr1:157976200-157982600 Enhancers HUES64 Cell Line embryonic stem cell
5 chr1:157976200-157982800 Enhancers ES-UCSF4 Cell Line embryonic stem cell
6 chr1:157977000-157983800 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
7 chr1:157978000-157982600 Enhancers Fetal Kidney kidney
8 chr1:157978600-157983200 Weak transcription Small Intestine intestine
9 chr1:157979200-157983200 Weak transcription Brain Germinal Matrix brain
10 chr1:157979800-157983400 Weak transcription Thymus Thymus
11 chr1:157979800-157991000 Weak transcription Primary hematopoietic stem cells short term culture blood
12 chr1:157980400-157984600 Weak transcription Rectal Mucosa Donor 29 rectum
13 chr1:157980600-157983200 Weak transcription Fetal Brain Male brain
14 chr1:157981000-157983200 Genic enhancers NHEK skin
15 chr1:157981200-157982600 Enhancers Fetal Lung lung
16 chr1:157981200-157982800 Enhancers HUVEC blood vessel
17 chr1:157981200-157983000 Enhancers HMEC breast
18 chr1:157981200-157983800 Weak transcription ES-WA7 Cell Line embryonic stem cell
19 chr1:157981200-157984200 Enhancers Ovary ovary
20 chr1:157981200-157985400 Genic enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
21 chr1:157981200-157987200 Genic enhancers IMR90 fetal lung fibroblasts Cell Line lung
22 chr1:157981400-157983000 Weak transcription Fetal Brain Female brain
23 chr1:157981400-157983000 Enhancers NHDF-Ad bronchial
24 chr1:157981400-157983400 Weak transcription H9 Cell Line embryonic stem cell
25 chr1:157981400-157983800 Enhancers Duodenum Smooth Muscle Duodenum
26 chr1:157981400-157984000 Enhancers Colon Smooth Muscle Colon
27 chr1:157981400-157985400 Enhancers Skeletal Muscle Male skeletal muscle
28 chr1:157981600-157982600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
29 chr1:157981600-157982600 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
30 chr1:157981600-157982600 Enhancers Stomach Smooth Muscle stomach
31 chr1:157981600-157982600 Enhancers A549 lung
32 chr1:157981600-157982800 Enhancers HSMM muscle
33 chr1:157981600-157983000 Enhancers NHLF lung
34 chr1:157981600-157983200 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
35 chr1:157981600-157983200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
36 chr1:157981600-157983400 Weak transcription Fetal Thymus thymus
37 chr1:157981600-157983600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
38 chr1:157981600-157985600 Enhancers NH-A brain
39 chr1:157981600-157986600 Weak transcription Pancreas Pancrea
40 chr1:157981600-157988200 Weak transcription Right Ventricle heart
41 chr1:157981800-157982600 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
42 chr1:157981800-157982800 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
43 chr1:157981800-157983000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
44 chr1:157981800-157983000 Weak transcription HUES6 Cell Line embryonic stem cell
45 chr1:157981800-157983000 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
46 chr1:157981800-157983000 Weak transcription Cortex derived primary cultured neurospheres brain
47 chr1:157981800-157983000 Weak transcription Esophagus oesophagus
48 chr1:157981800-157983000 Weak transcription Left Ventricle heart
49 chr1:157981800-157983200 Weak transcription HUES48 Cell Line embryonic stem cell
50 chr1:157981800-157983200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015