Variant report

Variant	rs192576207
Chromosome Location	chr7:66137062-66137063
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr7:66133503..66137997-chr7:66139253..66143655,5	MCF-7	breast:
2	chr7:66134305..66137456-chr7:66140702..66144674,4	K562	blood:

Extended variants
information (count: 8 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:8 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv532124	chr7:65371521-66234730	Enhancers Strong transcription Active TSS Weak transcription Flanking Active TSS Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	125 gene(s)	inside rSNPs	diseases
2	nsv1026559	chr7:65617368-66370805	Weak transcription Enhancers Flanking Active TSS Strong transcription Active TSS ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	116 gene(s)	inside rSNPs	diseases
3	esv2761151	chr7:66095738-66138285	Flanking Active TSS Strong transcription Genic enhancers Active TSS Weak transcription Enhancers Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	22 gene(s)	inside rSNPs	diseases
4	esv3486481	chr7:66101377-66137773	Flanking Active TSS Enhancers Strong transcription Active TSS Weak transcription Genic enhancers Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	22 gene(s)	inside rSNPs	diseases
5	esv3486482	chr7:66101377-66137773	Flanking Active TSS Weak transcription Active TSS Enhancers ZNF genes & repeats Strong transcription Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	22 gene(s)	inside rSNPs	diseases
6	esv3509629	chr7:66101713-66137585	Active TSS Enhancers Strong transcription Weak transcription Flanking Active TSS Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	22 gene(s)	inside rSNPs	diseases
7	esv3509631	chr7:66101713-66137585	Weak transcription Enhancers Strong transcription Flanking Active TSS ZNF genes & repeats Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	22 gene(s)	inside rSNPs	diseases
8	nsv525524	chr7:66136549-66141303	Weak transcription Enhancers Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:90 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:66120600-66146000	Weak transcription	Primary T cells from cord blood	blood
2	chr7:66120600-66146200	Weak transcription	Placenta Amnion	Placenta Amnion
3	chr7:66120800-66143600	Weak transcription	GM12878-XiMat	blood
4	chr7:66120800-66146000	Weak transcription	Rectal Mucosa Donor 29	rectum
5	chr7:66121000-66139400	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
6	chr7:66121000-66143600	Weak transcription	Primary B cells from peripheral blood	blood
7	chr7:66121000-66144000	Weak transcription	Skeletal Muscle Female	skeletal muscle
8	chr7:66121000-66146200	Weak transcription	iPS-18 Cell Line	embryonic stem cell
9	chr7:66121000-66146200	Weak transcription	iPS-20b Cell Line	embryonic stem cell
10	chr7:66121200-66137800	Weak transcription	HMEC	breast
11	chr7:66121400-66139800	Weak transcription	Rectal Smooth Muscle	rectum
12	chr7:66121400-66146000	Weak transcription	Adipose Nuclei	Adipose
13	chr7:66121400-66146000	Weak transcription	Rectal Mucosa Donor 31	rectum
14	chr7:66121600-66137800	Weak transcription	NH-A	brain
15	chr7:66121600-66144000	Weak transcription	Primary T killer memory cells from peripheral blood	blood
16	chr7:66121600-66145400	Weak transcription	Primary T cells fromperipheralblood	blood
17	chr7:66121600-66146200	Weak transcription	Duodenum Smooth Muscle	Duodenum
18	chr7:66121600-66146200	Weak transcription	HSMMtube	muscle
19	chr7:66121800-66144000	Weak transcription	Skeletal Muscle Male	skeletal muscle
20	chr7:66122200-66138200	Weak transcription	NHDF-Ad	bronchial
21	chr7:66122600-66146000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
22	chr7:66127800-66146000	Weak transcription	A549	lung
23	chr7:66128000-66138400	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
24	chr7:66128000-66144000	Weak transcription	Pancreas	Pancrea
25	chr7:66128000-66144000	Weak transcription	Spleen	Spleen
26	chr7:66128000-66145800	Weak transcription	Primary B cells from cord blood	blood
27	chr7:66128000-66146000	Weak transcription	Duodenum Mucosa	Duodenum
28	chr7:66128000-66146000	Weak transcription	Fetal Lung	lung
29	chr7:66128000-66146000	Weak transcription	HSMM	muscle
30	chr7:66128000-66146200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
31	chr7:66128000-66146200	Weak transcription	Sigmoid Colon	Sigmoid Colon
32	chr7:66128000-66146400	Weak transcription	H9 Cell Line	embryonic stem cell
33	chr7:66128400-66138200	Weak transcription	Primary monocytes fromperipheralblood	blood
34	chr7:66131200-66146000	Weak transcription	Stomach Smooth Muscle	stomach
35	chr7:66132000-66137400	Weak transcription	Primary neutrophils fromperipheralblood	blood
36	chr7:66132400-66146000	Weak transcription	Colon Smooth Muscle	Colon
37	chr7:66133600-66146000	Weak transcription	Primary hematopoietic stem cells	blood
38	chr7:66133800-66138200	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
39	chr7:66134200-66137200	Enhancers	Brain Cingulate Gyrus	brain
40	chr7:66134200-66137800	Weak transcription	Osteobl	bone
41	chr7:66134400-66143800	Weak transcription	Cortex derived primary cultured neurospheres	brain
42	chr7:66134400-66146000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
43	chr7:66134400-66146400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
44	chr7:66134600-66138200	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
45	chr7:66134600-66141400	Weak transcription	Breast Myoepithelial Primary Cells	Breast
46	chr7:66134600-66143800	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
47	chr7:66134600-66145800	Weak transcription	Thymus	Thymus
48	chr7:66135000-66138200	Weak transcription	Muscle Satellite Cultured Cells	--
49	chr7:66135000-66138200	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
50	chr7:66135000-66138200	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood

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