Variant report

Variant	rs192994640
Chromosome Location	chr7:128278787-128278788
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-FAM71F2-1	chr7:128278644-128281373	NONHSAT123217

Extended variants
information (count: 3 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv427806	chr7:128179989-128428182	ZNF genes & repeats Enhancers Strong transcription Weak transcription Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	56 gene(s)	inside rSNPs	diseases
2	nsv970938	chr7:128256300-128300276	Strong transcription Weak transcription Enhancers Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases
3	nsv981679	chr7:128278778-128282292	Weak transcription Strong transcription	lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:120 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:128237800-128290400	Weak transcription	HepG2	liver
2	chr7:128239200-128287200	Weak transcription	ES-I3 Cell Line	embryonic stem cell
3	chr7:128239200-128296400	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
4	chr7:128242600-128292800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
5	chr7:128246600-128284800	Weak transcription	Stomach Mucosa	stomach
6	chr7:128249600-128283200	Weak transcription	Hela-S3	cervix
7	chr7:128249600-128285800	Weak transcription	Fetal Heart	heart
8	chr7:128249600-128286800	Weak transcription	HSMMtube	muscle
9	chr7:128249600-128289000	Weak transcription	NHEK	skin
10	chr7:128249600-128293400	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
11	chr7:128249600-128295200	Weak transcription	NH-A	brain
12	chr7:128249600-128297600	Weak transcription	HUVEC	blood vessel
13	chr7:128249600-128308400	Weak transcription	HSMM	muscle
14	chr7:128249600-128312200	Weak transcription	Psoas Muscle	Psoas
15	chr7:128249600-128319600	Weak transcription	NHLF	lung
16	chr7:128252200-128287600	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
17	chr7:128256800-128288600	Weak transcription	Osteobl	bone
18	chr7:128258600-128287400	Strong transcription	Fetal Adrenal Gland	Adrenal Gland
19	chr7:128260000-128296400	Weak transcription	Primary T killer memory cells from peripheral blood	blood
20	chr7:128260400-128300600	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
21	chr7:128262200-128293200	Weak transcription	Brain Germinal Matrix	brain
22	chr7:128262600-128283800	Weak transcription	Small Intestine	intestine
23	chr7:128262800-128278800	Weak transcription	Muscle Satellite Cultured Cells	--
24	chr7:128263000-128286600	Weak transcription	Fetal Brain Male	brain
25	chr7:128265800-128289000	Strong transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
26	chr7:128266400-128290400	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
27	chr7:128267200-128287400	Strong transcription	Fetal Muscle Leg	muscle
28	chr7:128268000-128278800	Weak transcription	Primary T cells from cord blood	blood
29	chr7:128269800-128279400	Weak transcription	Primary B cells from cord blood	blood
30	chr7:128272200-128300000	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
31	chr7:128272400-128278800	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
32	chr7:128272400-128279200	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
33	chr7:128272400-128279400	Weak transcription	Skeletal Muscle Male	skeletal muscle
34	chr7:128272400-128285800	Weak transcription	Fetal Kidney	kidney
35	chr7:128272400-128290400	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
36	chr7:128272400-128290400	Weak transcription	K562	blood
37	chr7:128272400-128292400	Weak transcription	iPS-15b Cell Line	embryonic stem cell
38	chr7:128272400-128293200	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
39	chr7:128273000-128278800	Weak transcription	H1 Cell Line	embryonic stem cell
40	chr7:128273600-128278800	Weak transcription	iPS-18 Cell Line	embryonic stem cell
41	chr7:128273600-128279400	Weak transcription	Brain Substantia Nigra	brain
42	chr7:128273600-128290600	Weak transcription	Fetal Brain Female	brain
43	chr7:128273800-128278800	Weak transcription	Primary T cells fromperipheralblood	blood
44	chr7:128273800-128278800	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
45	chr7:128273800-128278800	Weak transcription	Cortex derived primary cultured neurospheres	brain
46	chr7:128273800-128278800	Weak transcription	Brain Cingulate Gyrus	brain
47	chr7:128273800-128283600	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
48	chr7:128273800-128291800	Weak transcription	Placenta Amnion	Placenta Amnion
49	chr7:128274200-128278800	Weak transcription	Primary B cells from peripheral blood	blood
50	chr7:128274200-128280000	Weak transcription	Fetal Lung	lung

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