The 2.0 version of rSNPBase

Variant report

Variant rs1935171
Chromosome Location chr1:203373946-203373947
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:48 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:203365400-203375000 Weak transcription Right Atrium heart
2 chr1:203370400-203374200 Weak transcription Stomach Smooth Muscle stomach
3 chr1:203370800-203375000 Weak transcription Fetal Muscle Trunk muscle
4 chr1:203371000-203375200 Weak transcription Lung lung
5 chr1:203371400-203374800 Weak transcription Duodenum Smooth Muscle Duodenum
6 chr1:203371400-203375000 Weak transcription Fetal Intestine Large intestine
7 chr1:203371400-203377600 Weak transcription Left Ventricle heart
8 chr1:203371600-203374800 Weak transcription Fetal Intestine Small intestine
9 chr1:203371600-203375000 Weak transcription Rectal Mucosa Donor 31 rectum
10 chr1:203372000-203374200 Weak transcription Stomach Mucosa stomach
11 chr1:203372200-203377400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
12 chr1:203372200-203377600 Weak transcription HMEC breast
13 chr1:203372400-203374800 Weak transcription Fetal Muscle Leg muscle
14 chr1:203372400-203375000 Weak transcription Rectal Mucosa Donor 29 rectum
15 chr1:203372400-203375800 Weak transcription HSMM muscle
16 chr1:203372400-203376200 Weak transcription Osteobl bone
17 chr1:203372400-203377600 Weak transcription HSMMtube muscle
18 chr1:203372600-203374000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
19 chr1:203372600-203375200 Weak transcription Skeletal Muscle Female skeletal muscle
20 chr1:203372600-203375400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
21 chr1:203372600-203375400 Weak transcription Brain Hippocampus Middle brain
22 chr1:203372600-203375800 Weak transcription Brain Substantia Nigra brain
23 chr1:203372600-203377200 Weak transcription Brain Inferior Temporal Lobe brain
24 chr1:203372600-203377400 Weak transcription Brain Anterior Caudate brain
25 chr1:203372800-203374200 Weak transcription Rectal Smooth Muscle rectum
26 chr1:203372800-203374800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
27 chr1:203372800-203375000 Weak transcription Skeletal Muscle Male skeletal muscle
28 chr1:203372800-203375000 Weak transcription NHDF-Ad bronchial
29 chr1:203372800-203375200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
30 chr1:203372800-203375600 Weak transcription Placenta Placenta
31 chr1:203372800-203375800 Weak transcription Brain Angular Gyrus brain
32 chr1:203372800-203376200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
33 chr1:203372800-203377000 Weak transcription Primary monocytes fromperipheralblood blood
34 chr1:203372800-203377200 Weak transcription Brain Cingulate Gyrus brain
35 chr1:203373000-203374000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
36 chr1:203373000-203374000 Weak transcription Colon Smooth Muscle Colon
37 chr1:203373000-203374000 Weak transcription Ovary ovary
38 chr1:203373000-203374800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
39 chr1:203373000-203374800 Weak transcription NHLF lung
40 chr1:203373000-203375000 Weak transcription Fetal Adrenal Gland Adrenal Gland
41 chr1:203373000-203375800 Weak transcription Adipose Nuclei Adipose
42 chr1:203373000-203376400 Weak transcription Monocytes-CD14+_RO01746 blood
43 chr1:203373000-203377600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
44 chr1:203373000-203377600 Weak transcription Spleen Spleen
45 chr1:203373200-203375200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
46 chr1:203373600-203375000 Weak transcription Fetal Lung lung
47 chr1:203373600-203379800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
48 chr1:203373800-203374400 ZNF genes & repeats H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived

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Last update: Aug 31, 2015