Variant report

Variant	rs1939140
Chromosome Location	chr11:94343966-94343967
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 7 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:7)

rs_ID	r²[population]
rs12280509	0.89[AFR][1000 genomes];0.81[AMR][1000 genomes];0.98[ASN][1000 genomes]
rs16920716	0.82[AFR][1000 genomes];0.87[AMR][1000 genomes];0.98[ASN][1000 genomes]
rs1939137	0.82[AFR][1000 genomes];0.87[AMR][1000 genomes];0.98[ASN][1000 genomes]
rs57878936	0.82[AFR][1000 genomes];0.87[AMR][1000 genomes];0.98[ASN][1000 genomes]
rs61433612	0.86[AFR][1000 genomes];0.87[AMR][1000 genomes];0.98[ASN][1000 genomes]
rs7111997	0.87[AFR][1000 genomes];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7927013	0.94[ASN][1000 genomes]

No data

Chromatin state (count:26 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:94296600-94344800	Weak transcription	Left Ventricle	heart
2	chr11:94321000-94344800	Weak transcription	Lung	lung
3	chr11:94323600-94351800	Weak transcription	Rectal Smooth Muscle	rectum
4	chr11:94325000-94344400	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
5	chr11:94325200-94357600	Weak transcription	Placenta Amnion	Placenta Amnion
6	chr11:94333000-94346200	Weak transcription	Stomach Smooth Muscle	stomach
7	chr11:94336400-94349600	Weak transcription	Stomach Mucosa	stomach
8	chr11:94336400-94350200	Weak transcription	Brain Angular Gyrus	brain
9	chr11:94340200-94345400	Strong transcription	Monocytes-CD14+_RO01746	blood
10	chr11:94341600-94344600	Weak transcription	Fetal Intestine Small	intestine
11	chr11:94341600-94344800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
12	chr11:94341600-94348200	Weak transcription	Fetal Stomach	stomach
13	chr11:94341600-94355200	Weak transcription	Ovary	ovary
14	chr11:94341600-94355200	Weak transcription	Pancreas	Pancrea
15	chr11:94341600-94355400	Weak transcription	Gastric	stomach
16	chr11:94342000-94347600	Weak transcription	Aorta	Aorta
17	chr11:94342600-94344200	Weak transcription	Duodenum Mucosa	Duodenum
18	chr11:94342600-94344400	Weak transcription	Adipose Nuclei	Adipose
19	chr11:94342600-94345000	ZNF genes & repeats	Primary hematopoietic stem cells G-CSF-mobilized Male	--
20	chr11:94342800-94345400	Weak transcription	Primary neutrophils fromperipheralblood	blood
21	chr11:94343000-94345000	ZNF genes & repeats	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
22	chr11:94343200-94344400	ZNF genes & repeats	Rectal Mucosa Donor 29	rectum
23	chr11:94343200-94344600	Weak transcription	Duodenum Smooth Muscle	Duodenum
24	chr11:94343200-94345600	Weak transcription	Rectal Mucosa Donor 31	rectum
25	chr11:94343400-94344800	Weak transcription	Primary monocytes fromperipheralblood	blood
26	chr11:94343600-94345000	ZNF genes & repeats	Primary hematopoietic stem cells	blood

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