Variant report

Variant	rs61433612
Chromosome Location	chr11:94347254-94347255
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 17 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:17)

rs_ID	r²[population]
rs12280509	0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12804365	0.93[EUR][1000 genomes]
rs16920716	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1939137	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1939140	0.86[AFR][1000 genomes];0.87[AMR][1000 genomes];0.98[ASN][1000 genomes]
rs4391779	0.93[EUR][1000 genomes]
rs4396252	0.93[EUR][1000 genomes]
rs4445593	0.88[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs4497362	0.88[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs513811	1.00[EUR][1000 genomes]
rs56927653	1.00[EUR][1000 genomes]
rs56984061	0.81[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs57878936	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs60268618	1.00[EUR][1000 genomes]
rs61228487	0.85[EUR][1000 genomes]
rs7111997	0.99[AFR][1000 genomes];0.93[AMR][1000 genomes];0.98[ASN][1000 genomes]
rs7927013	0.92[ASN][1000 genomes]

No data

Chromatin state (count:25 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:94323600-94351800	Weak transcription	Rectal Smooth Muscle	rectum
2	chr11:94325200-94357600	Weak transcription	Placenta Amnion	Placenta Amnion
3	chr11:94336400-94349600	Weak transcription	Stomach Mucosa	stomach
4	chr11:94336400-94350200	Weak transcription	Brain Angular Gyrus	brain
5	chr11:94341600-94348200	Weak transcription	Fetal Stomach	stomach
6	chr11:94341600-94355200	Weak transcription	Ovary	ovary
7	chr11:94341600-94355200	Weak transcription	Pancreas	Pancrea
8	chr11:94341600-94355400	Weak transcription	Gastric	stomach
9	chr11:94342000-94347600	Weak transcription	Aorta	Aorta
10	chr11:94344400-94351000	Weak transcription	Rectal Mucosa Donor 29	rectum
11	chr11:94345000-94354800	Weak transcription	Left Ventricle	heart
12	chr11:94346600-94349800	Weak transcription	Rectal Mucosa Donor 31	rectum
13	chr11:94346800-94347400	ZNF genes & repeats	Primary monocytes fromperipheralblood	blood
14	chr11:94346800-94347600	ZNF genes & repeats	Fetal Intestine Large	intestine
15	chr11:94346800-94347800	Weak transcription	Monocytes-CD14+_RO01746	blood
16	chr11:94346800-94353000	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
17	chr11:94346800-94353000	Weak transcription	Stomach Smooth Muscle	stomach
18	chr11:94347000-94347800	Weak transcription	Primary neutrophils fromperipheralblood	blood
19	chr11:94347000-94351400	Weak transcription	Sigmoid Colon	Sigmoid Colon
20	chr11:94347000-94353000	Weak transcription	Duodenum Smooth Muscle	Duodenum
21	chr11:94347000-94353600	Weak transcription	Right Ventricle	heart
22	chr11:94347000-94355400	Weak transcription	Brain Substantia Nigra	brain
23	chr11:94347000-94355600	Weak transcription	Brain Hippocampus Middle	brain
24	chr11:94347000-94355800	Weak transcription	NHDF-Ad	bronchial
25	chr11:94347200-94349600	ZNF genes & repeats	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived

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