Variant report

Variant	rs1967761
Chromosome Location	chr13:50383055-50383056
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 32 )
Associated
traits (count: 4 )

rSNPs within LD-proxies of this variant (count:32)

rs_ID	r²[population]
rs1009334	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1198314	0.86[AFR][1000 genomes];0.86[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs1198316	0.86[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs1198318	0.82[AFR][1000 genomes];0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1198326	0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1198330	0.81[ASN][1000 genomes]
rs1198331	0.98[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs1923661	0.82[AFR][1000 genomes];0.89[AMR][1000 genomes];0.97[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2407701	0.82[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs2897769	0.84[EUR][1000 genomes]
rs3903769	0.82[AMR][1000 genomes];0.93[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs6561564	0.82[AMR][1000 genomes];0.97[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs716371	0.93[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs7994774	0.85[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs8000298	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8000321	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9562920	0.92[EUR][1000 genomes]
rs9562923	0.92[EUR][1000 genomes]
rs9562924	0.92[EUR][1000 genomes]
rs9562930	1.00[ASN][1000 genomes]
rs9568315	0.85[EUR][1000 genomes]
rs9568319	0.92[EUR][1000 genomes]
rs9568320	0.92[EUR][1000 genomes]
rs9568327	0.92[EUR][1000 genomes]
rs9568328	0.92[EUR][1000 genomes]
rs9568331	0.82[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs9568332	0.85[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs957475	0.92[EUR][1000 genomes]
rs9591301	0.92[EUR][1000 genomes]
rs9596178	0.85[EUR][1000 genomes]
rs9596179	0.85[EUR][1000 genomes]
rs9596190	0.92[EUR][1000 genomes]

mRNA abundance (count:4)

SNP	Gene	Cis/trans	Tissue	Source
rs1967761	EBPL	Cis_1M	lymphoblastoid	RTeQTL
rs1967761	EBPL	cis	Artery Tibial	GTEx
rs1967761	EBPL	cis	Thyroid	GTEx
rs1967761	EBPL	cis	Skin Sun Exposed Lower leg	GTEx

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:50379600-50385200	Enhancers	HepG2	liver
2	chr13:50380600-50384600	Weak transcription	Pancreas	Pancrea
3	chr13:50381000-50384200	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
4	chr13:50382000-50383200	Weak transcription	Fetal Intestine Small	intestine

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